DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or42b and LOC1274121

DIOPT Version :10

Sequence 1:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster
Sequence 2:XP_061504375.1 Gene:LOC1274121 / 1274121 VectorBaseID:AGAMI1_011480 Length:430 Species:Anopheles gambiae


Alignment Length:423 Identity:83/423 - (19%)
Similarity:148/423 - (34%) Gaps:90/423 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 GCIYLYRAMKFIGWLPPKQGVLRYVYLTWTLMTFVWCTTYLPL---GFLGSYMTQIKSFSPGEF- 80
            || |:|...:.:.:        |.|.:.:...:||..:.|..:   |.:|..:..|.....|.. 
Mosquito    29 GC-YMYLGKERVSY--------RIVPICFMASSFVLLSLYSAIQAWGNMGLAVLSIVVLFYGIVG 84

  Fly    81 LTSLQVCI-NAYGSSVKVAITYSMLWRLIKAK----NILDQ-LDLRCTAMEEREKIHLVVARSNH 139
            :|.|.|.| |..|....:.|...|..|...:.    |:|.: .||.|.:::              
Mosquito    85 VTRLAVAISNPAGCYRSIQIAEEMYQRANGSNPAECNVLAKYTDLYCKSVQ-------------- 135

  Fly   140 AFLIFTFVYCGYAGSTYLSSVLSGRPPWQLY-------------NPFIDWHDGTLKLW--VASTL 189
               ::||.:       .||.|:....|:.||             .|||...| ....|  :|..|
Mosquito   136 ---LYTFFF-------VLSVVVLTLMPFALYLLRGERYLPLGIVLPFIAETD-DFGFWCTLAGQL 189

  Fly   190 EYMVMS--GAVLQDQLSDSYPLIYTLILRAHLDMLRERIRRLRSDENLSEAESYEELVKCVMDHK 252
            .||...  |.:....:..::.|...|.....::.|::...|:|| .|..:....::|||.:...:
Mosquito   190 AYMYSGSFGLIPSQNIYFAFVLNICLQYELQIERLKQLDERIRS-SNTPKLTVRDQLVKIIQLQQ 253

  Fly   253 ----------------------LILRYCAIIKPVIQGTIFTQFLLIGLVLGFTLINVFFFSDIWT 295
                                  |...|...|:...|...|.:||...|.:..||..:  ..:.| 
Mosquito   254 ESTKYATGSRVSKKKQNINAGILFYSYITHIERFYQLQSFVEFLCNSLQVALTLNEL--HRNFW- 315

  Fly   296 GIASFMFVITI-LLQTFPFCYTCNLIMEDCESLTHAIFQSNWVDASRRYKTTLLYFLQNVQQPIV 359
              ...:|::.| ::|....|....||....:.....::...|.:.....:....|.|::.|||..
Mosquito   316 --LPGLFILPIAVMQMLILCSLGTLIELKSDQFKDQLYDIAWPEMDLPEQGMFKYVLKSAQQPKQ 378

  Fly   360 FIAGGIFQISMSSNISVAKFAFSVITITKQMNI 392
            ...|....|:|:..::|......::..::.|.:
Mosquito   379 LTCGRFAVINMNLFLAVCMRCVGMVDGSRLMKL 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42bNP_523624.2 7tm_6 76..381 CDD:251636 70/351 (20%)
LOC1274121XP_061504375.1 None

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