DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42A and Tspan11

DIOPT Version :10

Sequence 1:NP_523623.1 Gene:Tsp42A / 35515 FlyBaseID:FBgn0033042 Length:237 Species:Drosophila melanogaster
Sequence 2:NP_081019.1 Gene:Tspan11 / 68498 MGIID:1915748 Length:253 Species:Mus musculus


Alignment Length:221 Identity:46/221 - (20%)
Similarity:77/221 - (34%) Gaps:87/221 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 VLSHLYLKAVMFPGLRLYPVALRPWLFWVRALTMV-------------------------AYILN 72
            :|:|  ||.::|         :..:.|||....::                         ||||.
Mouse    12 LLAH--LKYLLF---------IFNFFFWVGGAAVMAVGIWTLVEKSGYLSILASSTFAASAYILI 65

  Fly    73 AVLGIHMA-----------RQPTVLKYAGYMLVGSVVLLYTISIGVTRFMYRKRF---------- 116
            .|.|:.|.           .|.:.|  :.|..:..|:.|..:..||...:|.:|.          
Mouse    66 FVGGLVMTTGFLGFGAIIREQKSCL--STYFCLLLVIFLVELVAGVLAHVYYQRLSDELKWHLNS 128

  Fly   117 ---EFFAEMLVLQMWVR-DRLGKVEVEFECCGRSSVVDYQTA-------SSNRTWPIGSC----- 165
               |.:.:....::... |||   :.:|:|||.:|..|:|.:       :..|..|...|     
Mouse   129 TLTEHYGQPRAAEITASVDRL---QQDFKCCGSNSSADWQHSAYILSQEALGRQVPDSCCKTVVA 190

  Fly   166 -CGKQNCT--------GCTAKLSQYL 182
             ||::...        ||.|||.|::
Mouse   191 RCGQRAHPSNIYKVEGGCMAKLEQFV 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42ANP_523623.1 tetraspanin_LEL 101..185 CDD:239401 26/117 (22%)
Tspan11NP_081019.1 Tetraspanin 16..244 CDD:459767 44/215 (20%)
CD151_like_LEL 112..220 CDD:239408 24/108 (22%)

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