Protein Alignment Tsp42A and tsp-1

DIOPT Version :10

• Sequence 1: NP_523623.1
• Gene: Tsp42A / 35515
• FlyBaseID: FBgn0033042
• Length: 237
• Species: Drosophila melanogaster
• Sequence 2: NP_498804.1
• Gene: tsp-1 / 192096
• WormBaseID: WBGene00006627
• Length: 244
• Species: Caenorhabditis elegans
• Alignment Length: 223
• Identity: 48/223 - (21%)
• Similarity: 92/223 - (41%)
• Gaps: 53/223 - (23%)

  Fly    23 VVVGVIFLLD---VLSHLYLKAVMF---------PGLR--LY----PVAL-------RPWL---F 59
            ::..|:|.||   :|:.|.|.||.|         ..|:  :|    |.:|       |.||   |
 Worm     7 IIRSVLFFLDLAMLLAALALIAVGFWMGYDSSFDTDLKNVIYKYDDPKSLADAKFNIRVWLIVVF 71

  Fly    60 W-VRALTMVAYILNAVLGIHMARQPTVLKYAGYMLVGSVVLLYTISI----GVTRFMYRKRFEFF 119
            | :..|::.| ::.||||:..:..|   |..|:|:...|:::..:|:    ||...:.|......
 Worm    72 WSIIGLSLGA-VVTAVLGMISSVWP---KRKGFMITYLVLIIVLVSLEIGCGVAVLVRRNSLHDN 132

  Fly   120 AEMLVLQMWVRDRLGKVEV---EFECCGRSSVVDYQTASSNRTWPIGSCCGKQNCTGCTAKLSQY 181
            ...|:..|:..:.:..:::   ::.|||          ..|..:.:..|........|...:..
 Worm   133 TNSLIDAMYTTNSVNDLKIIQDKYNCCG----------IENSLFNVMYCGPMSQKPHCDVAVFD- 186

  Fly   182 LWTIEMDVARDNIIVSVLLFVAMIVMVL 209
              :::..:....||:.|:|.:..|.::|
 Worm   187 --SVDNTMMISGIILLVILILQTIAIIL 212

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp42A	NP_523623.1	tetraspanin_LEL	101..185	CDD:239401	12/90 (13%)
tsp-1	NP_498804.1	Tetraspanin	29..>160	CDD:459767	29/134 (22%)