DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or42a and Or19a

DIOPT Version :10

Sequence 1:NP_523622.2 Gene:Or42a / 35514 FlyBaseID:FBgn0033041 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_525013.2 Gene:Or19a / 59214 FlyBaseID:FBgn0041626 Length:387 Species:Drosophila melanogaster


Alignment Length:404 Identity:93/404 - (23%)
Similarity:173/404 - (42%) Gaps:35/404 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SPVRSRDATLYLLRCVFLMGVRKPPAK------FFVAY-VLWSFALNFCSTFYQPIGFLTGYISH 74
            |.|.|..|.:...|...:||:. ||.|      .:.|| ::|:...:.|.       :::..::.
  Fly     4 SKVDSTRALVNHWRIFRIMGIH-PPGKRTFWGRHYTAYSMVWNVTFHICI-------WVSFSVNL 60

  Fly    75 LSEFSPGEFLTSLQVAFNAWSCSTKVLIVWALVKRFDEANNLLDEMDRRITDPGERLQIHRAVSL 139
            |...|...|..||.|.........|::.|..:..:...::.||..:|:|:....||..|...:  
  Fly    61 LQSNSLETFCESLCVTMPHTLYMLKLINVRRMRGQMISSHWLLRLLDKRLGCDDERQIIMAGI-- 123

  Fly   140 SNRIFFFFMAVYMVYATNTFLSAIFIGRPP-----YQNYYPFLDWRSSTLHLALQAGLEYFAMAG 199
             .|..|.|..::...|....|..|:|....     |..:.|: :||.||......|.|...|:..
  Fly   124 -ERAEFIFRTIFRGLACTVVLGIIYISASSEPTLMYPTWIPW-NWRDSTSAYLATAMLHTTALMA 186

  Fly   200 ACFQDVCVDCYPVNFVLVLRAHMSIFAERLRRLGTYPYESQEQKYERLVQCIQDHKVILRFVDCL 264
            .....:.:..||..:::::..|....|.|:.:||........:....||..|.||::|||....|
  Fly   187 NATLVLNLSSYPGTYLILVSVHTKALALRVSKLGYGAPLPAVRMQAILVGYIHDHQIILRLFKSL 251

  Fly   265 RPVISGTIFVQFLVVGLVLGFTLINIVLFANLGSAIAALSFMAAVLLETTPFCILCNYLTEDCYK 329
            ...:|.|.|:||...... ..|:...:||.|:| .:..::.:..:::.||...:||......|.:
  Fly   252 ERSLSMTCFLQFFSTACA-QCTICYFLLFGNVG-IMRFMNMLFLLVILTTETLLLCYTAELPCKE 314

  Fly   330 ---LADALFQSNWIDEEKRYQKTLMYFLQKLQQPITFMAMNVFPISVGTNISVTKFSFSVFTLVK 391
               |..|::..||:.:...:::.|:..|.:.|.|:..::..:.|||:.|...:.|.::::.||:.
  Fly   315 GESLLTAVYSCNWLSQSVNFRRLLLLMLARCQIPMILVSGVIVPISMKTFTVMIKGAYTMLTLLN 379

  Fly   392 QMNISEKLAKSEME 405
            :      :.|:.:|
  Fly   380 E------IRKTSLE 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42aNP_523622.2 7tm_6 79..384 CDD:251636 74/312 (24%)
Or19aNP_525013.2 7tm_6 65..372 CDD:251636 74/312 (24%)

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