Protein Alignment Or42a and Or88a

DIOPT Version :10

• Sequence 1: NP_523622.2
• Gene: Or42a / 35514
• FlyBaseID: FBgn0033041
• Length: 406
• Species: Drosophila melanogaster
• Sequence 2: NP_524348.2
• Gene: Or88a / 41715
• FlyBaseID: FBgn0038203
• Length: 401
• Species: Drosophila melanogaster
• Alignment Length: 218
• Identity: 46/218 - (21%)
• Similarity: 83/218 - (38%)
• Gaps: 45/218 - (20%)

  Fly   202 FQDVCVDCYPVNFVL------VLRAHMSIFAERLRRLGTYPYESQEQKYERLVQCIQDHKVILRF 260
            |..:|..|....||.      |::.|:.:....|.|    .:.:.:.:     |.:.|.|   ||
  Fly   199 FDLMCTTCGVSFFVTFDNLFNVMQGHLVMHLGHLAR----QFSAIDPR-----QSLTDEK---RF 251

  Fly   261 VDCLRPVISGTIFVQFLVVGLVLGFTLINIVLF--ANLGSAIAALSFMAAVLLETTPFCILCNYL 323
            ...||.::..    |.|:.||...:..|..|.|  :|...| .:|.|...:|.||:...|:..|:
  Fly   252 FVDLRLLVQR----QQLLNGLCRKYNDIFKVAFLVSNFVGA-GSLCFYLFMLSETSDVLIIAQYI 311

  Fly   324 T----------EDCYK----------LADALFQSNWIDEEKRYQKTLMYFLQKLQQPITFMAMNV 368
            .          |.|.:          |..:|....|....:||:|..:.:.|..|:.....|..:
  Fly   312 LPTLVLVGFTFEICLRGTQLEKASEGLESSLRSQEWYLGSRRYRKFYLLWTQYCQRTQQLGAFGL 376

  Fly   369 FPISVGTNISVTKFSFSVFTLVK 391
            ..:::.....:.:.::.:||.:|
  Fly   377 IQVNMVHFTEIMQLAYRLFTFLK 399

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Or42a	NP_523622.2	7tm_6	79..384	CDD:251636	43/209 (21%)
Or88a	NP_524348.2	7tm_6	75..392	CDD:251636	43/209 (21%)