DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or42a and Or85f

DIOPT Version :9

Sequence 1:NP_523622.2 Gene:Or42a / 35514 FlyBaseID:FBgn0033041 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_524289.1 Gene:Or85f / 41119 FlyBaseID:FBgn0037685 Length:392 Species:Drosophila melanogaster


Alignment Length:419 Identity:85/419 - (20%)
Similarity:156/419 - (37%) Gaps:106/419 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 RSRDATLYLLR---------CVFLMGVRKPPAK------------FFVAYVLWS---FALNFCST 60
            |||....::.|         ||.:|..|...||            ..|.|::.|   ||.....:
  Fly    33 RSRRILYWIYRFLCLASHGVCVGVMVFRMVEAKTIDNVSLIMRYATLVTYIINSDTKFATVLQRS 97

  Fly    61 FYQPIGFLTGYISHLSEFSPGEFLTSL--QVAFNAWSCSTKVLIVWALVKRFDEANNLLDEMDRR 123
            ..|.:.      |.|:|..|...|..:  :|..:.|:.|...|::..:                 
  Fly    98 AIQSLN------SKLAELYPKTTLDRIYHRVNDHYWTKSFVYLVIIYI----------------- 139

  Fly   124 ITDPGERLQIHRAVSLSNRIFFFFMAVYMVYATNTFLSAIFIGRPPYQNYYPFLD--WRSSTLHL 186
                |..:.:.....:::.|.:|...|:      |::...     ||..|.|..|  |    :::
  Fly   140 ----GSSIMVVIGPIITSIIAYFTHNVF------TYMHCY-----PYFLYDPEKDPVW----IYI 185

  Fly   187 ALQAGLEYFAMAGACFQDVCVDCYPVNFVLVLRAHMSIFAERLRRLGTY-PYESQEQKYERLVQC 250
            ::.| ||:.........::..|.:.:.|.:.:..|   |...:|.|..: |....:|        
  Fly   186 SIYA-LEWLHSTQMVISNIGADIWLLYFQVQINLH---FRGIIRSLADHKPSVKHDQ-------- 238

  Fly   251 IQDHKVILRFVD------CLRPVISGTIFVQFLVVGLVLGFTLINIVLFANLGSAIAALSFMAAV 309
             :|.|.|.:.||      .|:..::| ||.:.|::.|:....:|..|....|........|...:
  Fly   239 -EDRKFIAKIVDKQVHLVSLQNDLNG-IFGKSLLLSLLTTAAVICTVAVYTLIQGPTLEGFTYVI 301

  Fly   310 LLETTPFCILCNYLTEDCY----------KLADALFQSNWIDEEKRYQKTLMYFLQKLQQPITFM 364
            .:.|:   ::..||.  ||          ::|.|::..::.|....|::.|:..:.:.|||:...
  Fly   302 FIGTS---VMQVYLV--CYYGQQVLDLSGEVAHAVYNHDFHDASIAYKRYLLIIIIRAQQPVELN 361

  Fly   365 AMNVFPISVGTNISVTKFSFSVFTLVKQM 393
            ||....||:.|...:...|:.|.|::.||
  Fly   362 AMGYLSISLDTFKQLMSVSYRVITMLMQM 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42aNP_523622.2 7tm_6 79..384 CDD:251636 61/325 (19%)
Or85fNP_524289.1 7tm_6 68..381 CDD:251636 70/373 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465916
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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