DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or42a and Or85d

DIOPT Version :9

Sequence 1:NP_523622.2 Gene:Or42a / 35514 FlyBaseID:FBgn0033041 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_524281.1 Gene:Or85d / 41011 FlyBaseID:FBgn0037594 Length:412 Species:Drosophila melanogaster


Alignment Length:337 Identity:64/337 - (18%)
Similarity:136/337 - (40%) Gaps:58/337 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 FNAWSCSTKVLIVWALVKRFDEANNLLDEMDRRITDPGERLQIHRAVSLSNRI--FFFFMAVYMV 153
            |..|:.|.:       .||..:..:.|:|:..:.....|...|...:|..:|.  |:|.|.:.::
  Fly   103 FKIWNISRQ-------RKRLTQVVSRLEELHPQGLAQQEPYNIGHHLSGYSRYSKFYFGMHMVLI 160

  Fly   154 YATNTFLSAIF------IGRPPYQN---YYPFLDWRSSTLHLALQAGLEYFAM-------AGACF 202
            :..|.:.:..:      :|...::.   ||.::.|..||       |..|:.|       ..||.
  Fly   161 WTYNLYWAVYYLVCDFWLGMRQFERMLPYYCWVPWDWST-------GYSYYFMYISQNIGGQACL 218

  Fly   203 Q-DVCVD---CYPVNFVLV----LRAHMSIFAERLRRLGTYPYESQEQK-----YERLVQCIQDH 254
            . .:..|   |..|..|::    |.||:.   ..:..:|::.::.:..:     ::.|:...||.
  Fly   219 SGQLAADMLMCALVTLVVMHFIRLSAHIE---SHVAGIGSFQHDLEFLQATVAYHQSLIHLCQDI 280

  Fly   255 KVILRFVDCLRPVISGTIFVQFLVVGLVLGFTLINIVLFANLGSAIAALSFMAAVLLETTPFCIL 319
            ..|.. |..|...:|.:..:.|:...:.:|..:.|:|:.         :.|:...:::.......
  Fly   281 NEIFG-VSLLSNFVSSSFIICFVGFQMTIGSKIDNLVML---------VLFLFCAMVQVFMIATH 335

  Fly   320 CNYLTEDCYKLADALFQSNWIDEEKRYQKTLMYFLQKLQQPITFMAMNVFPISVGTNISVTKFSF 384
            ...|.:...::..|::..:|...:.||:|.|:..:::.|||....|.....||:.|...:.:.|:
  Fly   336 AQRLVDASEQIGQAVYNHDWFRADLRYRKMLILIIKRAQQPSRLKATMFLNISLVTVSDLLQLSY 400

  Fly   385 SVFTLVKQMNIS 396
            ..|.|::.|.::
  Fly   401 KFFALLRTMYVN 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42aNP_523622.2 7tm_6 79..384 CDD:251636 60/323 (19%)
Or85dNP_524281.1 7tm_6 84..400 CDD:251636 60/323 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465914
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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