DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or42a and Or85a

DIOPT Version :9

Sequence 1:NP_523622.2 Gene:Or42a / 35514 FlyBaseID:FBgn0033041 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_524277.1 Gene:Or85a / 40991 FlyBaseID:FBgn0037576 Length:397 Species:Drosophila melanogaster


Alignment Length:384 Identity:135/384 - (35%)
Similarity:220/384 - (57%) Gaps:5/384 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 RSRDATLYLLRCVFLMGVRKPP--AKFFVAYVLWSFALNFCSTFYQPIGFLTGYISHLSEFSPGE 82
            ||||:.:||.|.:..||.|.||  ..::..|.:|:..:......:.|.|.:...|.....|:..:
  Fly    16 RSRDSLIYLNRSIDQMGWRLPPRTKPYWWLYYIWTLVVIVLVFIFIPYGLIMTGIKEFKNFTTTD 80

  Fly    83 FLTSLQVAFNAWSCSTKVLIVWALVKRFDEANNLLDEMDRRITDPGERLQIHRAVSLSNRIFFFF 147
            ..|.:||..|..:...|.:||..:.:||..|..::|.||.|.|...|::|:|||.:|.||:...:
  Fly    81 LFTYVQVPVNTNASIMKGIIVLFMRRRFSRAQKMMDAMDIRCTKMEEKVQVHRAAALCNRVVVIY 145

  Fly   148 MAVYMVYATNTFLSAIFIGRPPYQNYYPFLDWRSSTLHLALQAGLEYFAMAGACFQDVCVDCYPV 212
            ..:|..|.:.....|:.||:.|:..|.|.:   :...|..|...:|...|||....::.:|.||:
  Fly   146 HCIYFGYLSMALTGALVIGKTPFCLYNPLV---NPDDHFYLATAIESVTMAGIILANLILDVYPI 207

  Fly   213 NFVLVLRAHMSIFAERLRRLGTYPYESQEQKYERLVQCIQDHKVILRFVDCLRPVISGTIFVQFL 277
            .:|:|||.||.:.:||::.|.|...:..:|.|..||:|::|||:|:.:.:.|||:||.|:|:|.|
  Fly   208 IYVVVLRIHMELLSERIKTLRTDVEKGDDQHYAELVECVKDHKLIVEYGNTLRPMISATMFIQLL 272

  Fly   278 VVGLVLGFTLINIVLFANLGSAIAALSFMAAVLLETTPFCILCNYLTEDCYKLADALFQSNWIDE 342
            .|||:||...:::..:..:...:.:..:..|:|.:|.|||.:|..|:.||..|.:.||.|.||..
  Fly   273 SVGLLLGLAAVSMQFYNTVMERVVSGVYTIAILSQTFPFCYVCEQLSSDCESLTNTLFHSKWIGA 337

  Fly   343 EKRYQKTLMYFLQKLQQPITFMAMNVFPISVGTNISVTKFSFSVFTLVKQMNISEKLAK 401
            |:||:.|::||:..:||.|.|.|..:|||.:.|||.:.||:|||.|:|.:|:::|||.:
  Fly   338 ERRYRTTMLYFIHNVQQSILFTAGGIFPICLNTNIKMAKFAFSVVTIVNEMDLAEKLRR 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42aNP_523622.2 7tm_6 79..384 CDD:251636 108/304 (36%)
Or85aNP_524277.1 7tm_6 77..379 CDD:251636 108/304 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468567
Domainoid 1 1.000 64 1.000 Domainoid score I17159
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 76 1.000 Inparanoid score I7489
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D31412at7147
OrthoFinder 1 1.000 - - FOG0003850
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
77.000

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