DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or42a and Orco

DIOPT Version :9

Sequence 1:NP_523622.2 Gene:Or42a / 35514 FlyBaseID:FBgn0033041 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_001097687.1 Gene:Orco / 40650 FlyBaseID:FBgn0037324 Length:486 Species:Drosophila melanogaster


Alignment Length:466 Identity:82/466 - (17%)
Similarity:154/466 - (33%) Gaps:159/466 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 YVLWSFALNFCSTFYQPIGFLTGYISHLSEFSPGEFLTSLQVAFNAWSCSTKVLIVWALVKRFDE 112
            ::|.:.|||               ...::|.| |..:|:|...    .|.||.:.:....|.|..
  Fly    59 FILVNMALN---------------AEEVNELS-GNTITTLFFT----HCITKFIYLAVNQKNFYR 103

  Fly   113 ANNLLDEMDRRITDP--GERLQIHRAVSLS--NRIFFFFM------------------AVYMV-- 153
            ..|:.::::   |.|  .|....:.:::|:  .::||..|                  :|.||  
  Fly   104 TLNIWNQVN---THPLFAESDARYHSIALAKMRKLFFLVMLTTVASATAWTTITFFGDSVKMVVD 165

  Fly   154 YATNTFLSAIFIGRPPYQNYYPFLDWRSS-----TLHLALQAGLEYFAMAG-------------- 199
            :.||:.: .:.|.|.|.:::||   |.:|     .:..|.|.....|:|..              
  Fly   166 HETNSSI-PVEIPRLPIKSFYP---WNASHGMFYMISFAFQIYYVLFSMIHSNLCDVMFCSWLIF 226

  Fly   200 ACFQ--------------DVCVDCYPVNFVLVLRAHMSIFAERLRRL---------------GTY 235
            ||.|              ...:|.|..|...:.|   |:.|.....|               |.|
  Fly   227 ACEQLQHLKGIMKPLMELSASLDTYRPNSAALFR---SLSANSKSELIHNEEKDPGTDMDMSGIY 288

  Fly   236 PYESQ---------------------------------EQKYERLVQC-----IQDHKVILRFVD 262
            ..::.                                 .:|.|.:|:.     ::.||.::|.|.
  Fly   289 SSKADWGAQFRAPSTLQSFGGNGGGGNGLVNGANPNGLTKKQEMMVRSAIKYWVERHKHVVRLVA 353

  Fly   263 CLRPVISGTIFVQFLVVGLVLGFTL----------INIVLFANLGSAIAALSFMAAVLLETTPFC 317
            .:.......:.:..|...:.|  ||          :|:..|..:|       ::...|.:...||
  Fly   354 AIGDTYGAALLLHMLTSTIKL--TLLAYQATKINGVNVYAFTVVG-------YLGYALAQVFHFC 409

  Fly   318 ILCNYLTEDCYKLADALFQSNWIDEEKRYQKTLMYFLQKLQQPITFMAMNVFPISVGTNISVTKF 382
            |..|.|.|:...:.:|.:..:|.|..:..:..:....|:.|:.::......|.:|:....||...
  Fly   410 IFGNRLIEESSSVMEAAYSCHWYDGSEEAKTFVQIVCQQCQKAMSISGAKFFTVSLDLFASVLGA 474

  Fly   383 SFSVFTLVKQM 393
            ..:.|.::.|:
  Fly   475 VVTYFMVLVQL 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42aNP_523622.2 7tm_6 79..384 CDD:251636 75/424 (18%)
OrcoNP_001097687.1 7tm_6 70..472 CDD:251636 75/425 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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