DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or42a and Or63a

DIOPT Version :10

Sequence 1:NP_523622.2 Gene:Or42a / 35514 FlyBaseID:FBgn0033041 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_523895.2 Gene:Or63a / 38354 FlyBaseID:FBgn0035382 Length:420 Species:Drosophila melanogaster


Alignment Length:445 Identity:85/445 - (19%)
Similarity:167/445 - (37%) Gaps:87/445 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LYTQSKDSPVRSRD--ATLYLLRCVFLMGVR-KPPAKFFVAYVLWSFALNFCS--TFYQPIGFLT 69
            :|:..:.:.::.|:  :...::|..:.:|.. ..|::......:|:..|:..|  :.|.....|.
  Fly     1 MYSPEEAAELKRRNYRSIREMIRLSYTVGFNLLDPSRCGQVLRIWTIVLSVSSLASLYGHWQMLA 65

  Fly    70 GYISHLSEFSPGE-------FLTSLQVAFNAWSCSTKVLIVWALVKRFDEANNLLD--EMDRRIT 125
            .||..:...  ||       ||||:.   ..|........::.|::: ...:.||.  |:..|::
  Fly    66 RYIHDIPRI--GETAGTALQFLTSIA---KMWYFLFAHRQIYELLRK-ARCHELLQKCELFERMS 124

  Fly   126 DPGERLQIHRAV-SLSNRIFFFFMAVYMVY-------ATNTFLSAIFIG------RP-------- 168
            |.....:|.:.| |..||.:.......::|       .||.|:::..|.      :|        
  Fly   125 DLPVIKEIRQQVESTMNRYWASTRRQILIYLYSCICITTNYFINSFVINLYRYFTKPKGSYDIML 189

  Fly   169 PYQNYYPFLDWRSSTL---HLALQAGLEYFAMAGACFQDVCVDCYPVNF---VLVLRAHMSIFAE 227
            |..:.||  .|....|   :..:|..||      .|...:|..| .|:|   .:||..|......
  Fly   190 PLPSLYP--AWEHKGLEFPYYHIQMYLE------TCSLYICGMC-AVSFDGVFIVLCLHSVGLMR 245

  Fly   228 RLRRL---GTYPYESQEQKYERLVQCIQDHKVILRFV----DCLRPVISGTIFVQFLVVGLVLGF 285
            .|.::   .|......:::.|.|..||..::.:..|.    :|.|.:    .|.|||:.....|.
  Fly   246 SLNQMVEQATSELVPPDRRVEYLRCCIYQYQRVANFATEVNNCFRHI----TFTQFLLSLFNWGL 306

  Fly   286 TLINIVLFANLGSAIAALSFMAAVLLETTPFCILCNY-LTEDCY----------KLADALFQSNW 339
            .|..:.:.....|:|        .::..|.:.:...| :...||          ::|:|.:|..|
  Fly   307 ALFQMSVGLGNNSSI--------TMIRMTMYLVAAGYQIVVYCYNGQRFATASEEIANAFYQVRW 363

  Fly   340 IDEEKRYQKTLMYFLQKLQQPITFMAMNVFPISVGTNISVTKFSFSVFTLVKQMN 394
            ..|.:.::..:...|.:..:...........:|:.|.:::.:.|...|.|::.:|
  Fly   364 YGESREFRHLIRMMLMRTNRGFRLDVSWFMQMSLPTLMAMVRTSGQYFLLLQNVN 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42aNP_523622.2 7tm_6 79..384 CDD:251636 69/359 (19%)
Or63aNP_523895.2 7tm_6 76..408 CDD:251636 68/356 (19%)

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