DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or42a and Or43a

DIOPT Version :9

Sequence 1:NP_523622.2 Gene:Or42a / 35514 FlyBaseID:FBgn0033041 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_523647.2 Gene:Or43a / 35644 FlyBaseID:FBgn0026389 Length:376 Species:Drosophila melanogaster


Alignment Length:389 Identity:84/389 - (21%)
Similarity:165/389 - (42%) Gaps:89/389 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KFFVAYVLWSFALNFCSTFY--QPIGFLTGYISHLSEFSPGEFLTSLQVAFNAWSCSTKVLIVWA 105
            ||  |:||...|:|.....|  :..|.|..:|.::..||         ..|||      ::..|.
  Fly    32 KF--AFVLPVTAMNLMQFVYLLRMWGDLPAFILNMFFFS---------AIFNA------LMRTWL 79

  Fly   106 LV---KRFDE--------ANNLLDEMD---RRITDPGERLQIHRAV-SLS--------------- 140
            ::   ::|:|        .:::||..|   |.|....||...:.|: :||               
  Fly    80 VIIKRRQFEEFLGQLATLFHSILDSTDEWGRGILRRAEREARNLAILNLSASFLDIVGALVSPLF 144

  Fly   141 --NRIFFFFMAVYMVYATNT-FLSAIFIGRPP-----YQNYYPFLDWRSSTLHLALQAGLEYFAM 197
              .|...|.:|:..|..|:: ....|::.:.|     ...|.||         ::|.|||..|. 
  Fly   145 REERAHPFGLALPGVSMTSSPVYEVIYLAQLPTPLLLSMMYMPF---------VSLFAGLAIFG- 199

  Fly   198 AGACFQDVCVDCYPVNFVLVLRAHMSIFAERLRRLGTYPYESQEQKYERLVQCIQDHKVILRFVD 262
                                 :|.:.|...||.::|. ..:|:|::::||..||..|..::|:|.
  Fly   200 ---------------------KAMLQILVHRLGQIGG-EEQSEEERFQRLASCIAYHTQVMRYVW 242

  Fly   263 CLRPVISGTIFVQFLVVGLVLGFTLINIVLFANLGSAIAALSFMAAVLLETTPFCILCNYLTEDC 327
            .|..:::..:.|:.::.|.::...|..:.:..:....|:.:.::..:|.....:....|.:..:.
  Fly   243 QLNKLVANIVAVEAIIFGSIICSLLFCLNIITSPTQVISIVMYILTMLYVLFTYYNRANEICLEN 307

  Fly   328 YKLADALFQSNWIDEEKRYQKTLMYFLQKLQQPITFMAMNVFPISVGTNISVTKFSFSVFTLVK 391
            .::|:|::...|.:...|::|||:.||.:.|.|:.....||:|:::....|:...|:|.||:::
  Fly   308 NRVAEAVYNVPWYEAGTRFRKTLLIFLMQTQHPMEIRVGNVYPMTLAMFQSLLNASYSYFTMLR 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42aNP_523622.2 7tm_6 79..384 CDD:251636 68/342 (20%)
Or43aNP_523647.2 7tm_6 56..364 CDD:251636 71/354 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465776
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003850
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.940

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