DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or42a and Or42b

DIOPT Version :9

Sequence 1:NP_523622.2 Gene:Or42a / 35514 FlyBaseID:FBgn0033041 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster


Alignment Length:394 Identity:188/394 - (47%)
Similarity:263/394 - (66%) Gaps:9/394 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PTLYTQSKDSPVRSRDATLYLLRCVFLMGVRKPPAKFFVAYVLWSFALN---FCSTFYQPIGFLT 69
            |...|:.|    ||||..:||.|.:..:| ..||.:..:.||..::.|.   :|:| |.|:|||.
  Fly     8 PAPLTEQK----RSRDGCIYLYRAMKFIG-WLPPKQGVLRYVYLTWTLMTFVWCTT-YLPLGFLG 66

  Fly    70 GYISHLSEFSPGEFLTSLQVAFNAWSCSTKVLIVWALVKRFDEANNLLDEMDRRITDPGERLQIH 134
            .|::.:..||||||||||||..||:..|.||.|.::::.|..:|.|:||::|.|.|...||.:||
  Fly    67 SYMTQIKSFSPGEFLTSLQVCINAYGSSVKVAITYSMLWRLIKAKNILDQLDLRCTAMEEREKIH 131

  Fly   135 RAVSLSNRIFFFFMAVYMVYATNTFLSAIFIGRPPYQNYYPFLDWRSSTLHLALQAGLEYFAMAG 199
            ..|:.||..|..|..||..||.:|:||::..||||:|.|.||:||...||.|.:.:.|||..|:|
  Fly   132 LVVARSNHAFLIFTFVYCGYAGSTYLSSVLSGRPPWQLYNPFIDWHDGTLKLWVASTLEYMVMSG 196

  Fly   200 ACFQDVCVDCYPVNFVLVLRAHMSIFAERLRRLGTYPYESQEQKYERLVQCIQDHKVILRFVDCL 264
            |..||...|.||:.:.|:||||:.:..||:|||.:....|:.:.||.||:|:.|||:|||:...:
  Fly   197 AVLQDQLSDSYPLIYTLILRAHLDMLRERIRRLRSDENLSEAESYEELVKCVMDHKLILRYCAII 261

  Fly   265 RPVISGTIFVQFLVVGLVLGFTLINIVLFANLGSAIAALSFMAAVLLETTPFCILCNYLTEDCYK 329
            :|||.||||.|||::||||||||||:..|:::.:.||:..|:..:||:|.|||..||.:.|||..
  Fly   262 KPVIQGTIFTQFLLIGLVLGFTLINVFFFSDIWTGIASFMFVITILLQTFPFCYTCNLIMEDCES 326

  Fly   330 LADALFQSNWIDEEKRYQKTLMYFLQKLQQPITFMAMNVFPISVGTNISVTKFSFSVFTLVKQMN 394
            |..|:|||||:|..:||:.||:||||.:||||.|:|..:|.||:.:||||.||:|||.|:.||||
  Fly   327 LTHAIFQSNWVDASRRYKTTLLYFLQNVQQPIVFIAGGIFQISMSSNISVAKFAFSVITITKQMN 391

  Fly   395 ISEK 398
            |::|
  Fly   392 IADK 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42aNP_523622.2 7tm_6 79..384 CDD:251636 153/304 (50%)
Or42bNP_523624.2 7tm_6 76..381 CDD:251636 153/304 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468565
Domainoid 1 1.000 64 1.000 Domainoid score I17159
eggNOG 1 0.900 - - E1_2C9X1
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 76 1.000 Inparanoid score I7489
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D31412at7147
OrthoFinder 1 1.000 - - FOG0003850
OrthoInspector 1 1.000 - - otm50671
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
98.900

Return to query results.
Submit another query.