DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or42a and Or33c

DIOPT Version :10

Sequence 1:NP_523622.2 Gene:Or42a / 35514 FlyBaseID:FBgn0033041 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_523555.1 Gene:Or33c / 34603 FlyBaseID:FBgn0026390 Length:384 Species:Drosophila melanogaster


Alignment Length:407 Identity:95/407 - (23%)
Similarity:173/407 - (42%) Gaps:64/407 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LRRWFPTLYTQSKDSPVRSRDATLYLLRCVFLMGVRKPPAKFFVAYVLWSFALNFCSTFYQPIGF 67
            :|...||.:   |||   ||...||::                        .|:...|.:.|:..
  Fly    17 MRLLVPTFF---KDS---SRPVQLYVV------------------------LLHILVTLWFPLHL 51

  Fly    68 LTGYISHLSEF-SPGEFLTSLQVAFNAWSCSTKVLIVWALVKRFDEANNLLDEMDRRITDPGERL 131
            |.    ||... |..||..:|.::....:||.|.:.....:.:..|..:|::::|..|....|..
  Fly    52 LL----HLLLLPSTAEFFKNLTMSLTCVACSLKHVAHLYHLPQIVEIESLIEQLDTFIASEQEHR 112

  Fly   132 QIHRAVSLSNRIF--FFFMAVYMVYATNTFLSAIFI------GRPPYQNYYPFLDWRSSTLHLAL 188
            .....|....|.|  ..:::..|:||  .||..:|:      ....|..|:|| |..|:....|:
  Fly   113 YYRDHVHCHARRFTRCLYISFGMIYA--LFLFGVFVQVISGNWELLYPAYFPF-DLESNRFLGAV 174

  Fly   189 QAGLEYFAMAGACFQDVCVDCYPVNFVLVLRAHMSIFAERLRRLGTYPYESQEQKYERLVQCIQD 253
            ..|.:.|:|....||.:..|.|....:.:|..|:.:::.|:.:||.:..|: ...::||:..|:.
  Fly   175 ALGYQVFSMLVEGFQGLGNDTYTPLTLCLLAGHVHLWSIRMGQLGYFDDET-VVNHQRLLDYIEQ 238

  Fly   254 HKVILRFVDCLRPVISGTIFVQFLVVGLVLGFTLINIVLFANLGSAIAA---LSFMAAVLLETTP 315
            ||:::||.:.:...||....||....|..| ..:::.:||. :|..|:.   |.|...|.::..|
  Fly   239 HKLLVRFHNLVSRTISEVQLVQLGGCGATL-CIIVSYMLFF-VGDTISLVYYLVFFGVVCVQLFP 301

  Fly   316 FCILCNYLTEDCYKLADALFQSNWIDEEKRYQKTLMYFLQKLQQPIT-------FMAMNVFPISV 373
            .|...:.:.|:..:|..|:|.|.|.|:.:.::..|:.|.|     :|       ..|..:..:::
  Fly   302 SCYFASEVAEELERLPYAIFSSRWYDQSRDHRFDLLIFTQ-----LTLGNRGWIIKAGGLIELNL 361

  Fly   374 GTNISVTKFSFSVFTLV 390
            ....:..|.::|:|.:|
  Fly   362 NAFFATLKMAYSLFAVV 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42aNP_523622.2 7tm_6 79..384 CDD:251636 76/322 (24%)
Or33cNP_523555.1 7tm_6 60..372 CDD:251636 76/322 (24%)

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