DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or42a and Or24a

DIOPT Version :9

Sequence 1:NP_523622.2 Gene:Or42a / 35514 FlyBaseID:FBgn0033041 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_523470.3 Gene:Or24a / 33623 FlyBaseID:FBgn0026394 Length:398 Species:Drosophila melanogaster


Alignment Length:407 Identity:87/407 - (21%)
Similarity:152/407 - (37%) Gaps:93/407 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 PPAKFFVAYVLWSFALNFCSTF-----------YQPIGFLTGYISHLSEFSPGEFLTSLQVAFNA 93
            |..|..|...||||...|..|:           |.||...|.    |....|        ||.:.
  Fly    31 PEQKRTVLVKLWSFFNFFILTYGCYAEAYYGIHYIPINIATA----LDALCP--------VASSI 83

  Fly    94 WSCSTKVLIVWALVKRFDEANNLLDEMDRRITDPGERLQIHRAVSLSNRIF-----FFFMAVYMV 153
            .|....|.|.|..    ||..:|::.: |.:|   |:.:..|.:....|.:     ..|:.:...
  Fly    84 LSLVKMVAIWWYQ----DELRSLIERV-RFLT---EQQKSKRKLGYKKRFYTLATQLTFLLLCCG 140

  Fly   154 YATNTFLSA----------------------------IFIGRPPYQNYYPFLDWRSSTLHLALQA 190
            :.|:|..|.                            :.:..|.|...|..:.|. ..:.:....
  Fly   141 FCTSTSYSVRHLIDNILRRTHGKDWIYETPFKMMFPDLLLRLPLYPITYILVHWH-GYITVVCFV 204

  Fly   191 GLE--------YFAMAGACFQDVCVDCYPVNFVLVLRAHMSIFAERLRRLGTYPYESQEQKYERL 247
            |.:        ||.:...|.||...|...|              |.:.:   .|.|::|.:..|.
  Fly   205 GADGFFLGFCLYFTVLLLCLQDDVCDLLEV--------------ENIEK---SPSEAEEARIVRE 252

  Fly   248 VQCIQD-HKVILRFVDCLRPVISGTIFVQFLVVGLVLGFTLINIVLFANLGSAIAALSFMAAVLL 311
            ::.:.| |..:....:.|..|:.......|:...|::|.::::|:||:.|| .|..:.:..||.:
  Fly   253 MEKLVDRHNEVAELTERLSGVMVEITLAHFVTSSLIIGTSVVDILLFSGLG-IIVYVVYTCAVGV 316

  Fly   312 ETTPFCILCNYLTEDCYKLADALFQSNWIDEEKRYQKTLMYFLQKLQQPITFMAMNVFPISVGTN 376
            |...:|:..:::.|.|..||.:.|.|:|.....|.||..:..:.:.|:.:| :.:..|..|:.|.
  Fly   317 EIFLYCLGGSHIMEACSNLARSTFSSHWYGHSVRVQKMTLLMVARAQRVLT-IKIPFFSPSLETL 380

  Fly   377 ISVTKFSFSVFTLVKQM 393
            .|:.:|:.|:..|.|.:
  Fly   381 TSILRFTGSLIALAKSV 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42aNP_523622.2 7tm_6 79..384 CDD:251636 70/346 (20%)
Or24aNP_523470.3 7tm_6 68..388 CDD:251636 72/359 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465157
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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