DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or42a and Or22c

DIOPT Version :9

Sequence 1:NP_523622.2 Gene:Or42a / 35514 FlyBaseID:FBgn0033041 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_523454.2 Gene:Or22c / 33381 FlyBaseID:FBgn0026396 Length:402 Species:Drosophila melanogaster


Alignment Length:387 Identity:88/387 - (22%)
Similarity:160/387 - (41%) Gaps:70/387 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 AYVLWSFALNFCSTFYQPIGFLTGYISHLSEFSPG-EFLTSLQVAFNAWSC--STK---VLIVWA 105
            |::|:.||            |....:..:.|.|.| ..|.:|.||..|: |  :||   ||.:|.
  Fly    41 AHLLFVFA------------FAMVVVGAVGEVSYGCVHLDNLVVALEAF-CPGTTKAVCVLKLWV 92

  Fly   106 LVKRFDEANNLLDEMDRRI--------TDPGERLQIHRAVSLSNRIFFFFMAVYMVYATNTFLSA 162
                |..:|....|:.:|:        ....:|:.:..|.: :||:..      ::.::.|..:|
  Fly    93 ----FFRSNRRWAELVQRLRAILWESRRQEAQRMLVGLATT-ANRLSL------LLLSSGTATNA 146

  Fly   163 IFIGRP------------PYQNYYPFLDWRSSTLHLALQAG---LEYFAM--AGAC--FQDVCVD 208
            .|..:|            |.|...||.....|   .|:|.|   |.|..:  :|||  |....||
  Fly   147 AFTLQPLIMGLYRWIVQLPGQTELPFNIILPS---FAVQPGVFPLTYVLLTASGACTVFAFSFVD 208

  Fly   209 CYPVNFVLVLRAHMSIFAERLRRL---------GTYPYESQEQKYERLVQCIQDHKVILRFVDCL 264
            .:.:...|.:.....:..:.:||:         ..:..|...:...||.|.::.|..|:.|...|
  Fly   209 GFFICSCLYICGAFRLVQQDIRRIFADLHGDSVDVFTEEMNAEVRHRLAQVVERHNAIIDFCTDL 273

  Fly   265 RPVISGTIFVQFLVVGLVLGFTLINIVLFANLGSAIAALSFMAAVLLETTPFCILCNYLTEDCYK 329
            ....:..:.:.||....||..|:::|:|..:..|.:..:.::.|.|.:...:|...|:::|....
  Fly   274 TRQFTVIVLMHFLSAAFVLCSTILDIMLNTSSLSGLTYICYIIAALTQLFLYCFGGNHVSESSAA 338

  Fly   330 LADALFQSNWIDEEKRYQKTLMYFLQKLQQPITFMAMNVFPISVGTNISVTKFSFSVFTLVK 391
            :||.|:...|...:.|.:|.::..|::.|:..| :|:..|..|:....|:...:.|..||:|
  Fly   339 VADVLYDMEWYKCDARTRKVILMILRRSQRAKT-IAVPFFTPSLPALRSILSTAGSYITLLK 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42aNP_523622.2 7tm_6 79..384 CDD:251636 78/346 (23%)
Or22cNP_523454.2 7tm_6 69..392 CDD:251636 75/338 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465103
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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