DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or42a and Or82a

DIOPT Version :10

Sequence 1:NP_523622.2 Gene:Or42a / 35514 FlyBaseID:FBgn0033041 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_730794.1 Gene:Or82a / 318778 FlyBaseID:FBgn0041621 Length:385 Species:Drosophila melanogaster


Alignment Length:375 Identity:78/375 - (20%)
Similarity:145/375 - (38%) Gaps:74/375 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 ISHLSEFSPGEFLTSLQ------VAFN------AWSC----STKVLIV-------------WALV 107
            :.|:|...   |:.|.|      ||:|      ..:|    .|.:|.|             |.::
  Fly    31 LKHISSLI---FVISAQYPLISYVAYNRNDMEKVTACLSVVFTNMLTVIKISTFLANRKDFWEMI 92

  Fly   108 KRFDEANNLLDEMDRRITDPGERLQIHRAVSLSNRIFFFFMAVYMVYATNTFL-----SAIFIG- 166
            .||   ..:.::....|....|.|..   |:.:|::..|....|.|....|.|     ..:.|| 
  Fly    93 HRF---RKMHEQSASHIPRYREGLDY---VAEANKLASFLGRAYCVSCGLTGLYFMLGPIVKIGV 151

  Fly   167 ----------RPPYQNYYPFLDWRSSTLHL----ALQAGLEYFAMAGACFQDVCVDCYPVNFVLV 217
                      ..|....:||.|..|....:    .:...:...|.|.|      ||...::|.:.
  Fly   152 CRWHGTTCDKELPMPMKFPFNDLESPGYEVCFLYTVLVTVVVVAYASA------VDGLFISFAIN 210

  Fly   218 LRAHMSIFAERLRRLGTYPYESQEQKYE-RLVQCIQDHKVILRFVDCLRPVISGTIFVQFLVVGL 281
            ||||   |....|::..:.:.|.|...: ||...::.|.::|.....||.:.:.|:..||::..|
  Fly   211 LRAH---FQTLQRQIENWEFPSSEPDTQIRLKSIVEYHVLLLSLSRKLRSIYTPTVMGQFVITSL 272

  Fly   282 VLGFTLINIVLFANLGSAIAAL---SFMAAVLLETTPFCILCNYLTEDCYKLADALFQSNWIDEE 343
            .:|..:..:|  .|:.|.:..|   ||..:::|:...:|.....:..:..::..|:..|||....
  Fly   273 QVGVIIYQLV--TNMDSVMDLLLYASFFGSIMLQLFIYCYGGEIIKAESLQVDTAVRLSNWHLAS 335

  Fly   344 KRYQKTLMYFLQKLQQPITFMAMNVFPISVGTNISVTKFSFSVFTLVKQM 393
            .:.:.:|...:.:.|:.:...| ..|..|:...:.:.:.:.|:.||:|.:
  Fly   336 PKTRTSLSLIILQSQKEVLIRA-GFFVASLANFVGICRTALSLITLIKSI 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42aNP_523622.2 7tm_6 79..384 CDD:251636 72/357 (20%)
Or82aNP_730794.1 7tm_6 65..374 CDD:251636 65/326 (20%)

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