DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or42a and Or65c

DIOPT Version :9

Sequence 1:NP_523622.2 Gene:Or42a / 35514 FlyBaseID:FBgn0033041 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_729163.2 Gene:Or65c / 318013 FlyBaseID:FBgn0041623 Length:410 Species:Drosophila melanogaster


Alignment Length:404 Identity:80/404 - (19%)
Similarity:148/404 - (36%) Gaps:107/404 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LYTQSKD--SPVRSRDATLYLLR---CVFLM--GVR-----KPPAKFFVAYVLWSFALNFCSTFY 62
            |||.||:  .|.||...||.:::   |...|  ||.     |......:|:::..|.:.|...::
  Fly    45 LYTTSKERQMPYRSSWHTLVIIQATVCFLTMCYGVTESLGDKVQMGRDIAFIIGFFYIAFKIYYF 109

  Fly    63 QPIGFLTGYISHLSEFSPGEFLTSLQVAFNAWSCSTKVLIVWALVKRFDEANNLLDEMDRRITDP 127
            |..|         .|..  |.:.:|: .|:.|:......:.:...||                  
  Fly   110 QWYG---------DELD--EVVEALE-TFHPWAQKGPGAVDYRTAKR------------------ 144

  Fly   128 GERLQIHRAVSLSNRIFFFFMAVYMVYATNTFLS---AIFIGRP--------PYQNYYPFLDWRS 181
                            ::|.:|.::..:...||.   .:.|..|        |....:|| .|..
  Fly   145 ----------------WYFTLAFFLASSWLVFLCIFILLLITSPLWVHQQILPLHAAFPF-QWHE 192

  Fly   182 STLHLALQA--------GLEYFAMAGACFQDVCVDCY-PVNFVLVLRAHMSIFAERLRRL--GTY 235
            .::|....|        .:.||.....|.:.:.|..| .:.|.:      .:....||.|  ..:
  Fly   193 KSIHPISHAFIYLFQTWNVMYFLTWLVCIEGLSVSIYVEITFAI------EVLCLELRHLHQRCH 251

  Fly   236 PYESQEQKYERLVQCIQDHKVILRFVDCLRPVISGTIFVQFLVVGLVLGFTLINI-VLFA----- 294
            .||....:..||||.   |:.|:..:|....|..||:.:|     :.:.|.|::: ||.|     
  Fly   252 GYEQLRLETNRLVQF---HQKIVHILDHTNKVFHGTLIMQ-----MGVNFFLVSLSVLEAMEARK 308

  Fly   295 --NLGSAIAALSFMAAVLLETTPFCILCNYLTEDCYKLADALFQS-NWIDEEKRYQKTLMYFLQK 356
              .:.:..|.|..:|  |...:.:....:.|::....:::|.::: :.|...|...:.|...:::
  Fly   309 DPKVVAQFAVLMLLA--LGHLSMWSYFGDLLSQKSLTISEAAYEAYDPIKGSKDVYRDLCLIIRR 371

  Fly   357 LQQPITFMAMNVFP 370
            .|:|: .|..:.||
  Fly   372 GQEPL-IMRASPFP 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42aNP_523622.2 7tm_6 79..384 CDD:251636 59/323 (18%)
Or65cNP_729163.2 7tm_6 87..399 CDD:251636 65/362 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465211
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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