DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or42a and Or1a

DIOPT Version :9

Sequence 1:NP_523622.2 Gene:Or42a / 35514 FlyBaseID:FBgn0033041 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_525029.2 Gene:Or1a / 30978 FlyBaseID:FBgn0029521 Length:392 Species:Drosophila melanogaster


Alignment Length:258 Identity:47/258 - (18%)
Similarity:78/258 - (30%) Gaps:90/258 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 DWRSSTLHLALQAGLEYFAMAGACFQ-------------------------------DV------ 205
            :|||......|.|.:.:...||....                               ||      
  Fly   116 EWRSQNQRGQLMAAIYFMMCAGTSVSFLLMPVALTMLKYHSTGEFAPVSSFRVLLPYDVTQPHVY 180

  Fly   206 CVDCYPVNFVLVLRAHMSIFAERL------------RRLGTYPYESQEQKYERLVQCIQ------ 252
            .:||..:.|||......:...:.|            ||||        |:.:|:..|..      
  Fly   181 AMDCCLMVFVLSFFCCSTTGVDTLYGWCALGVSLQYRRLG--------QQLKRIPSCFNPSRSDF 237

  Fly   253 -------DHKVILRFVDCLRPVISGTIFVQFLVV-GLVLGFTLINIVLFANLGSAIAALSFMAAV 309
                   :|..:|:.|...........||:.::: ||..  ::|...:..:.....|.|.|.:.|
  Fly   238 GLSGIFVEHARLLKIVQHFNYSFMEIAFVEVVIICGLYC--SVICQYIMPHTNQNFAFLGFFSLV 300

  Fly   310 LLETTPFCILCNYLTEDCYKLADALFQSNWID-EEKRYQKTLMYFLQKLQQPITFMAMNVFPI 371
            :  ||..||.              ||.:..:. |.:|:.:.|...:.....|.....:.:|||
  Fly   301 V--TTQLCIY--------------LFGAEQVRLEAERFSRLLYEVIPWQNLPPKHRKLFLFPI 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42aNP_523622.2 7tm_6 79..384 CDD:251636 47/258 (18%)
Or1aNP_525029.2 7tm_6 79..376 CDD:251636 47/258 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465641
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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