DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or42a and LOC1270503

DIOPT Version :10

Sequence 1:NP_523622.2 Gene:Or42a / 35514 FlyBaseID:FBgn0033041 Length:406 Species:Drosophila melanogaster
Sequence 2:XP_309205.2 Gene:LOC1270503 / 1270503 VectorBaseID:AGAMI1_001876 Length:407 Species:Anopheles gambiae


Alignment Length:427 Identity:80/427 - (18%)
Similarity:148/427 - (34%) Gaps:113/427 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 WFPTLYTQSKDSPVRSRDATLYLLRCVF--------LMGVRKPPAKFFVAYVLWSFALNFCSTFY 62
            |...|:..|:         |:.||:...        |:....||.|          ||::.:|| 
Mosquito    47 WKRALFLLSR---------TVQLLQYALWADRFYLALVDPSSPPGK----------ALHYGNTF- 91

  Fly    63 QPIGFLTGYISHLSEFSPGEFLTSLQVAFNAWSCSTKVLIVWALVKRFDEANNLLDEMDR---RI 124
               |.||..::.:                        :::.|.|    .....|::.:.|   ||
Mosquito    92 ---GVLTMMLARM------------------------LVVRWYL----PHVRQLMEYLRRQRGRI 125

  Fly   125 TDPG---ERLQIHRAVS---------LSNRIFFFFMAVYM--VYATNTFLSAIFIGRPPYQNYYP 175
             :|.   .||...|.|:         |::|:...|...|.  :|.....|:.             
Mosquito   126 -EPAPDTHRLSYRRIVNIAITFQLIGLADRLVAGFSRTYRQELYEVPANLAE------------- 176

  Fly   176 FLDW-RSSTLHLALQAGLEYFAMAGACFQDVCVDCYPVNFVLV-LRAHMSIFAERLRRLGTYPYE 238
             |.| ....:|:   ...::.:..||.:.   |....:|.::: |...::..|:...||.|....
Mosquito   177 -LQWPMVVAVHV---LSFDFASRWGAAYN---VSLTGMNSIMMGLYDELTSIAQEYGRLLTKEKN 234

  Fly   239 SQEQ---KYER-LVQCIQDHKVILRFVDCLRPVISGTIFVQFLVVGLVLGFTLINIVLFANLGSA 299
            .|..   .:|| ..:.::.|:..|..:..|:|.:..|..|.|....|.|......|.........
Mosquito   235 GQADIWTSFERNTARAVRRHETFLWQLGQLKPFLQTTFLVMFYSAALFLAIGTFMISANGTTTYG 299

  Fly   300 IAALSFMAAVLLETTPFCILCNYLTEDCYKLADALFQSNWIDE-------EKRYQK---TLMYFL 354
            :....|:.|:|||....|.|.:.|.|...::...|...:|..|       ..||::   :|:..:
Mosquito   300 VILSGFLFALLLECYWCCQLVDRLNEVNTQIGILLCSLDWPVELQYTKATASRYRQARSSLLIMM 364

  Fly   355 QKLQQPITFMAMNVFPISVGTNISVTKFSFSVFTLVK 391
            .|.|:.:......:|.:|.....|:.|.::::...::
Mosquito   365 SKTQKSLGIRCGGMFEMSSEAFASLVKLTYTMLMFLR 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42aNP_523622.2 7tm_6 79..384 CDD:251636 63/337 (19%)
LOC1270503XP_309205.2 None

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