DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ZnT41F and cdf-1

DIOPT Version :9

Sequence 1:NP_610185.1 Gene:ZnT41F / 35513 FlyBaseID:FBgn0025693 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_509096.2 Gene:cdf-1 / 180923 WormBaseID:WBGene00000393 Length:586 Species:Caenorhabditis elegans


Alignment Length:575 Identity:145/575 - (25%)
Similarity:253/575 - (44%) Gaps:141/575 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 DDNHQSLGIQQDPD-TRDDR--LSDYQDRYYSVNNNSVNRE---------VVTIGSNVVRVPEEQ 81
            ||...|.|.:::.: |.:||  .:|..||   .:||:.:.|         |::...|...:.:..
 Worm    14 DDGLSSTGTKKNMEVTMEDRSVKADKADR---DDNNTTSTELLGKMRQTKVISTNQNNNHLIDRM 75

  Fly    82 T--WEVPLLGDCGDSARNQSSET--------EFDMQRECCN------HQPGFRAN--SKSKSAQE 128
            .  :|:.::       ::||:||        ||.:...|.:      |....:..  .||:|.:.
 Worm    76 VSIYEMEMI-------KSQSTETISDVSDVLEFTVIDNCSHGTHTLEHDLRLKGEPIGKSESVKG 133

  Fly   129 AKYKIMLAVALCCVFMIIEFLGGYVAGSLAIMTDAAHLASDCISFVIGLVAIWIGGRPPDERMSF 193
            ....:::.:.:..:|..:||:.|.|..|:|::.|:.|:|:|.::.::....|.|..| |..|:.:
 Worm   134 VSRSLIIQIGMTVIFCALEFITGVVCSSIAMLADSYHMAADVMALIVAFTCIKIATR-PSTRLGY 197

  Fly   194 GYKRFEVIGALASILGIWFVTTLLVVV---AIERIFSQDFELNADMMMLISGIGIVINIVMMFVL 255
            |:.|.|.:|...:  || |:.|:.|:|   |:.||.:.....:...:::|..||::||:..||.|
 Worm   198 GWVRAETLGGFFN--GI-FMCTVCVLVFQEAVGRIINVHMITHPLQVLVIGFIGLLINLFGMFNL 259

  Fly   256 HGSWFVNGNG-HGHSH--SHSHSHS-----------HSHGNGH--------------EPNDSLSQ 292
            .|....:|.| |||||  ||.|||:           |||.|||              ||:    .
 Worm   260 SGHGHSHGGGSHGHSHGGSHGHSHNNKKTKKNDGHGHSHANGHGHSHDGKSDCNGEEEPD----H 320

  Fly   293 TRSNSNFLTTIGSQSAST-ADEEDSIR---KEINSN------------EHKIVITNGKKPTLTGT 341
            ||.|..|      :|||. |:.:.::|   .:.|||            ::.|:.|..::.|..||
 Worm   321 TRLNGKF------RSASAMANSDANVRLLDNDDNSNDIIERRLSGVNSQNTIIATVDRQMTPYGT 379

  Fly   342 -----------SNMELA------HEDKNLNLRAAMIHVIGDLVQSIGVFLAAVLIKVCPG---AK 386
                       :|::.:      .:|||:|:....:|::.|...|:.|.::|..:...|.   |.
 Worm   380 HMASEVLNVSSNNLDKSAQKTEQKKDKNVNIHGVWLHLLSDAFGSVIVMISAGFVYFLPTWKIAA 444

  Fly   387 YADPLCTLIFSIIVIMTTLRLFRESLGIIVNAVPQNLNMRTLHLELGSIEGVRSLHHLNVWQQTS 451
            |.||:.::..:.|:..|.:.|.:.|...::...|:.|::..:..:|.||.||..:..|:||....
 Worm   445 YLDPILSISLASIMGFTAVVLVKTSGEKLLKQTPEGLDLEKVKKDLCSIVGVSKVEKLSVWTLCG 509

  Fly   452 QQRVLMVHLVTDSRADGNEVLQAATALVSSPRYNIK--------HSTIQLEPTTE 498
            |:.:...|           |.....|:.....|.||        ||| .:|||.|
 Worm   510 QRIIAAAH-----------VNICHPAVFPEAAYKIKNYFHDLGVHST-TIEPTFE 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZnT41FNP_610185.1 CDF 142..495 CDD:273544 114/427 (27%)
Cation_efflux 142..416 CDD:279834 94/340 (28%)
cdf-1NP_509096.2 CzcD 135..552 CDD:224151 117/442 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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