DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gp210 and Nup210

DIOPT Version :10

Sequence 1:NP_610184.2 Gene:Gp210 / 35512 FlyBaseID:FBgn0266580 Length:1876 Species:Drosophila melanogaster
Sequence 2:NP_061285.2 Gene:Nup210 / 54563 MGIID:1859555 Length:1886 Species:Mus musculus


Alignment Length:2031 Identity:521/2031 - (25%)
Similarity:899/2031 - (44%) Gaps:337/2031 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LCMILLILVRNHASEAARLNHPRVLLPIFEDKAINFTLEVDEPNCYKWSSSRQDLISVMPIYKGF 69
            |..:||:.|...|: ||:||.|:||||......:|||||..| .||:|||:|.::.|:.|:....
Mouse    11 LWALLLLQVVGPAA-AAKLNIPKVLLPFTRATRVNFTLEASE-GCYRWSSTRPEVASIEPLGSSE 73

  Fly    70 SECAYQAVVTVRTHDRRRNTAIVFAEEVQTGETLRSDVIVDVIASLNVRTATRQLYLEEAPAMFE 134
            .:|:.:|||..|.....|.|:|:|||::.||:.||.|.|||:|..:.:.:.||:||||::|...:
Mouse    74 QQCSQKAVVQARLTQPARLTSIIFAEDITTGQVLRCDAIVDLIHGIQIVSTTRELYLEDSPLELK 138

  Fly   135 LHAFDEQGNEFFTLEGIEFDWEILEPG-----SKRPTAMRYLTFTDSPYHTVPPT-IEKFEADGK 193
            :.|.|.:||.|.||.|:.|||.|::..     |....|:|.|||.:|.|  :||: |.:.|...|
Mouse   139 IQALDSEGNTFSTLAGLVFDWTIVKDTEANGFSDSHNALRILTFLESTY--IPPSYISEMEKAAK 201

  Fly   194 KGHMILLEGINTGTAKVTIAMPQAEYKHVRPVEVYISVLANIIIEPS-EVTIMAGDSVSFRILQL 257
            :|..||:.|:.||::|:...:.:|.||:|||.||.:.:|.||::.|: :|.::.|.|:.:::.::
Mouse   202 QGDTILVSGMKTGSSKLKARIQEAVYKNVRPAEVRLLILENILLNPAYDVYLLVGTSIHYKVQKI 266

  Fly   258 KMDRLHVID--NNQYYLEVEDS----------SIAYLRGNSA--TGAALGRTQVFLRDRNMADSD 308
            :..::..:.  ::||.|::::|          .:|.|..:::  |...:|::.:.|..|::. ..
Mouse   267 RQGKITELSMPSDQYELQLQNSIPDPQGDPARPVAILTQDTSRVTAMQMGQSNLVLGHRSIR-MQ 330

  Fly   309 EVQKGPSALLTVAYPNRLSISLLPHLNWVTVQGEHHAIALDLFAADGQKITMGTKYSINSEVDES 373
            ...:.|::.:.|.....|..::.|...||...|..:||.:::|.....|:.......|.:.:...
Mouse   331 GASRLPNSTIYVVEAGYLGFTVYPGDRWVLETGHLYAITIEVFDRSSNKVYPSDNIRIEAVLPAE 395

  Fly   374 FFAIVDRTRNGSRLFGQAKKEGITQVY----------GSYKDLSV----QAELQIFEELQLAPTK 424
            ||.::..::|||....:|.:.|.|.:.          |....|.|    |.|:.|...:.|.|:.
Mouse   396 FFEVLSSSQNGSYHHIRAIQSGQTAISATLTSVVDQDGGVHVLQVPVWNQQEVDIHIPITLYPSI 460

  Fly   425 VVLPYDPNSLKPLKLQFHASGGDNNYAWFSGNPQVIQIDTQGQATTE-------IRDVKSAYVNQ 482
            :..|:.|.: ...:....|.||..|::|.|.:..|..:..:|..||.       ||    |:..|
Mouse   461 LTFPWQPKT-GAYQYTIKAHGGSGNFSWSSSSSMVATVTVKGVMTTSGDTGLSVIR----AHDVQ 520

  Fly   483 EVLKDGG-KLTAHTTVKVALSKNQKISRVAHIYFLPPERLQITRSNFETALKDFVHVHVGVYARI 546
            ..|..|. |:.......:..:..|..:||.|...||     :|.|.|...               
Mouse   521 NPLHFGEMKVYVIEPSSMEFAPCQVEARVGHTLELP-----LTISGFMPG--------------- 565

  Fly   547 NNSEVPYTSCDNLHFQLDFSQPILQLEGNEGA--------EAAHEACHVLRLRATAVGTTSLRVS 603
            ..||| .|..|..||.|     ::::| |:|.        ....|.|..::::|.|.|:|:|.||
Mouse   566 GGSEV-VTLSDCSHFDL-----VVEVE-NQGVFQPLPGRLPPGPEHCSGVKVKADAQGSTTLLVS 623

  Fly   604 YMYMDKVLYDIIDLYVFEPLVVLNPIENEVVLPVGSSRNIIYANGPQRSFTVAAEIIQS-TAFDE 667
            |.:....|...|.|..:.||..::| .:..|:.:|||:.:::..||:......::..:: |:.|.
Mouse   624 YTHGHVHLDAKITLAAYLPLKAVDP-SSVAVVTLGSSKEMLFEGGPRPWVLEPSKFFRNVTSEDT 687

  Fly   668 KILKVSKLEFDTQNLITAFTVL--CRELGETQFTYRVHNSLPTSS-FALYQSEVTTKVHCVRPRF 729
            ..:.:|.|............||  |:.|||......|.|....|: |...:..|...: |..|..
Mouse   688 GSISLSLLGPPASRNYQQHRVLMTCQALGEQVIALSVGNRPSLSNPFPAVEPTVVKSI-CAPPSR 751

  Fly   730 LKL---YARHNLRDSCP-LEKRTSLLFLKDPENKIEIEIEVHDSNNRRLMNISSLGLDWEFSAGE 790
            |.|   ||...|..||| |::...::.:....|.: :::..:|...||..|.|||.:.||.|   
Mouse   752 LTLMPVYALPQLDLSCPLLQQNKQVVPVSSHRNPL-LDLGAYDQQGRRFDNFSSLSIQWESS--- 812

  Fly   791 ERYQKNIIPHRQISELEFNHGVTLPSRD----------LLVLTLSEVATNFRIKGTVSQYNDKLL 845
                     ...::.:|.:..:.|.|:|          |..:::.|.:....|..|.:.|....|
Mouse   813 ---------RPLLASIELDQPMQLVSQDDGNGQKKLHGLQTVSVHEASGTTAISATATGYQQSHL 868

  Fly   846 AQHGIHAERPPFGIKNPQTGLIYTPLIENEIRLHAVNSTLLPKDYMSIFLASGYSERIPIAQGSG 910
            ::         ..:|.|...|:  | :...|.|..|....:..:.|:|:...|....:.|.:|||
Mouse   869 SE---------ARVKQPHDPLV--P-VSASIELILVEDVRVSPEEMTIYNHPGVQVELYITEGSG 921

  Fly   911 YLQLELSEAGIVQVEYNENTRILVLTPLRLGHVRLELTDRCL-MNEPSHLSISVVGIGAIEVVSM 974
            |..|..|...|::|.|.:...:.::.||..|...:.:.|.|| ...|:...|.|..|..:.|..:
Mouse   922 YFFLNTSTQDIIKVAYQDTRGVALVHPLLPGSSTVMVHDLCLAFPAPAKAIIHVSDIQELYVRVV 986

  Fly   975 DRLERTTRIEAIVRLFDTNDNLLLVDQSKLSAY----DLSEVVADQSILSVRLGEQENVGPGEIR 1035
            |::|....::|.||:.|      ...:..|:.|    ||....|.|.|..|.|.|..:      .
Mouse   987 DKVEIGKAVKAYVRVLD------FYKKPFLAKYFTFMDLKLQAASQIITLVTLDEALD------N 1039

  Fly  1036 YTIT----GNQVGET----KILFQSGKGIYKVASDPLNIQVFAPIRLFPRDSTLVVGSSIQVYFH 1092
            ||.|    |..:|:|    .:..:||:   :|:|.|..|:||.|.||.||..||::|:.:|:...
Mouse  1040 YTATFLVHGVAIGQTSLSASVTDKSGQ---RVSSTPQQIEVFPPFRLIPRKVTLIIGAMMQITSE 1101

  Fly  1093 GGPHPNTNMIISVEKEQVATISST-VVTAHKLGTTKIVGKCLLKNPVTGKDEVVSQDSVEVHVVA 1156
            |||.|.:|::.|:..|.||.:||: :|....:|...::|.....:..|||..:||||.|||.|:.
Mouse  1102 GGPQPQSNILFSINNESVAAVSSSGLVRGLMVGNGSVLGVVQAVDAETGKVIIVSQDLVEVEVLQ 1166

  Fly  1157 LKGVQIRTPLVRIHSGAVMPATLWGL-SDLSPMILG-TLQNTKISWKVSQPQVVEI--------- 1210
            |:.|:||.|:.|:.:|..||..:.|: |:.||...| .:......|.|::..|:::         
Mouse  1167 LQAVRIRAPITRMRTGTQMPVFVTGITSNQSPFSFGNAVPGLTFHWSVTKRDVLDLRGRHHEVSI 1231

  Fly  1211 ---------FNVFTTAGIEYQSGDLISVRVRALNP--------GKATITASVTLADGTILPPATV 1258
                     .||:  ..::.::|  :.|.|:||:|        ||       .|:|       .:
Mouse  1232 RLPPQYNFAMNVY--GRVKGRTG--LRVVVKALDPTAGQLHGLGK-------ELSD-------EI 1278

  Fly  1259 DLQVFKTLELVTPNAIKMDSILAAPRSILQLKSNMDNVV---YKLDD--RSNGIVSVTPDGLVHT 1318
            .:|||:.|.|:.|. |:.:.||.:|.|.::|::|.|...   |::.|  ....||.....|.:.:
Mouse  1279 QIQVFEKLRLLNPE-IEAEQILMSPNSFIKLQTNRDGAAILSYRVLDGPEKAPIVHTDEKGFLVS 1342

  Fly  1319 KDSLGRDL--IIATT---ADQSLPIGIEVKNVQYILVTLMPILKLRELEHK-----IPRGMNFVF 1373
            ...:|...  :||..   .:|::.:.::|..|.|:.:::.|:|   ..:||     :|.||...|
Mouse  1343 GSGIGVSTLEVIAQEPFGTNQTILVAVKVSPVSYLRISMSPVL---HTQHKEALTALPLGMTVTF 1404

  Fly  1374 KVSLHDNLGNEL-SHN-IEDFNGLRYELGNKDDVDVQIDNNLTFALNLMRETNNVIGISLKDSTG 1436
            .|..||:.|:.. :|| :.:|      ..|:||. |||....|....::|..:  :|::|.....
Mouse  1405 IVHFHDSSGDIFHAHNSVLNF------ATNRDDF-VQIGKGATNNTCIIRTVS--VGLTLLHVWD 1460

  Fly  1437 VKH--SMDFIKLSVVESDNLFPTKT-IFSVGDIICFDSPLT----LSSTWRSSNEQIVYINKHTG 1494
            |:|  ..||:.|.|:::  :.|..: ...||||:|..|.||    :|.||.||...::|::..||
Mouse  1461 VEHLGLSDFVPLPVLQA--ITPELSGAVVVGDILCLASVLTSLGGVSGTWSSSASHVLYVDPKTG 1523

  Fly  1495 IA-----------QVLSHRLKPGEKIEITNGDETKRGGFLKYDLEVRESDTILFVKSVDTFSGPE 1548
            :|           ..::.:||..::|.:....:............::|:.......||       
Mouse  1524 VAIARDAGSVTVYYEIAGQLKTFKEIVVGTPQKIVARRLHSAQTSIQEATASKVTVSV------- 1581

  Fly  1549 YRGQLVIRNHLQSEKYSNLIAQNVSKCARELGSV--PVNFFTCRLAAK-DALGRNLLKMYKVDAL 1610
                        .::.|||:.: .|...||....  |.:..:|:|..| |........::.|:..
Mouse  1582 ------------GDRSSNLLGE-CSPAQREAIEALHPESLISCQLQFKQDVFDFPACDVFTVEPG 1633

  Fly  1611 FEPSIGQYSCRL---QLLTGFIELLSIVKTH--------DVYLELEAVVAKGVSDKMSLKLVPGI 1664
            |:.::|||.|.:   :|....::.|::.||.        ..|..:|.|.|:       :...||:
Mouse  1634 FDAALGQYLCSVTMRRLTDKQLKHLNMKKTSLAVTASIPSSYTSVEKVGAE-------VPFSPGL 1691

  Fly  1665 KVFPESVRVTD-LKPHEIHISGLDKALLKVQVKPSDSKYFAVDFI-EHGHGLSK---YRLELFDD 1724
            ......:.::: ....|:.:.|..::|..::||.......|  |: |...||..   |.:.:.|.
Mouse  1692 YANQAEILLSNHYTSSEVKVFGAVESLENLEVKSGSPAVLA--FVKEKSFGLPSFITYTVGVLDP 1754

  Fly  1725 L-----PLDENFYILVVSPDTKQSIEVPIIGNTMLAPKCTDRR----YGGPLVYRILENLGFVLT 1780
            .     ||  :..:...||.|.|:|.:|:....:|     |||    ||..|:...|::..    
Mouse  1755 TAGSQGPL--STALTFSSPATNQAITIPVTVAFVL-----DRRGPGPYGASLLSHFLDSYQ---- 1808

  Fly  1781 TTVIVIISIWVYMSCFQTQGVTQVNFEAFKKGKSRTELMQQSGRSSQDDT---FGDSFNVRNFSP 1842
                  :..:.:.:......||.:.:......:.....:..:.|:|...:   ...|....|..|
Mouse  1809 ------VMFFTFFALLAGTAVTIIAYHTVCAPRELASPLALTPRASPQHSPHYLASSPAAFNTLP 1867

  Fly  1843 DRRR--PPSNALSESY 1856
            ..|:  |||...|.:|
Mouse  1868 SGRKASPPSGLWSPAY 1883

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gp210NP_610184.2 None
Nup210NP_061285.2 Big_2 1079..1152 CDD:396788 25/72 (35%)

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