DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7791 and frem2a

DIOPT Version :9

Sequence 1:NP_610183.1 Gene:CG7791 / 35511 FlyBaseID:FBgn0033038 Length:699 Species:Drosophila melanogaster
Sequence 2:XP_005155437.1 Gene:frem2a / 555681 ZFINID:ZDB-GENE-081119-3 Length:3119 Species:Danio rerio


Alignment Length:334 Identity:64/334 - (19%)
Similarity:107/334 - (32%) Gaps:126/334 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   420 YERVGKPNQDCHFTIQGGKRMPDGSYQLPVVVVML----------------------GLAQPRW- 461
            |:.:....|..|         |...|  |||.|..                      .|.:.|| 
Zfish  2327 YDNIRTSKQSAH---------PPAGY--PVVCVTACNPKYPDYDKTGSICISERINNTLTRYRWL 2380

  Fly   462 ----SGPT-LLSPAR---------------LDNLFHEMGHAMHSMLARTEHQHVTGTRCSTDFAE 506
                |||. :.||.|               ||:::.:.|..:.............|...|   :.
Zfish  2381 ISAPSGPDGVTSPMREADFDTFFTSSKMITLDSIYFQAGSRVQCAARAVNSNGDEGLELS---SP 2442

  Fly   507 VPSVLMEYFAGDPRVLRTFARHFQTHEPISEDMLRRLCASKNLFAASETQLQVFYSALD------ 565
            :.|:.||.....||.|.|...     ||.|..:  |...:::|..|:..:|.|....:|      
Zfish  2443 IVSISMEEGMCQPRKLGTVGA-----EPFSAKL--RYTGAEDLEYANLIKLTVTMPHIDGMLPVV 2500

  Fly   566 ---------------------------QEYHGASARHGQSSTDTLRSVQDHYYGLPYVDNTAWQL 603
                                       .:::..|.||| ..|...|::|.....|||        
Zfish  2501 STRALSNFDLTLSPDGTRVGNHRCSNLLDFNEVSTRHG-FLTKATRNIQSVGETLPY-------- 2556

  Fly   604 RFSHLV-GYGA-KYYAYLVSKTIASWIWQ--TYFEANPFNRQAGEKYRAEILAH-GGAVPSRKLV 663
            ::|.:: |.|. ::|..|   .:.:.:|:  :|::            .:|:|.. ||.:.:...|
Zfish  2557 QYSPVLRGQGTLRFYRNL---NLEACLWEFVSYYD------------MSELLTDCGGTIGTDGQV 2606

  Fly   664 ANFLQREMT 672
            .|.:|..:|
Zfish  2607 LNLVQSYVT 2615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7791NP_610183.1 M3A_MIP 46..680 CDD:188996 64/334 (19%)
frem2aXP_005155437.1 Cadherin_3 220..368 CDD:292802
Cadherin_3 335..480 CDD:292802
Cadherin_3 449..612 CDD:292802
Cadherin_3 581..743 CDD:292802
Cadherin_3 709..856 CDD:292802
Cadherin_3 825..973 CDD:292802
Cadherin_3 939..1105 CDD:292802
Cadherin_3 1071..1219 CDD:292802
Cadherin_3 1187..1343 CDD:292802
Cadherin_3 1312..1456 CDD:292802
Cadherin_3 1424..1565 CDD:292802
Cadherin_3 1534..1697 CDD:292802
Calx-beta 1715..1802 CDD:295344
Calx-beta 1828..1926 CDD:295344
Calx-beta 1951..2046 CDD:281194
Calx-beta 2073..2152 CDD:295344
Calx-beta 2193..2285 CDD:295344
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.