DRSC/TRiP Functional Genomics Resources

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Protein Alignment IKBKB and nekl-1

DIOPT Version :9

Sequence 1:XP_005273547.1 Gene:IKBKB / 3551 HGNCID:5960 Length:805 Species:Homo sapiens
Sequence 2:NP_001293320.1 Gene:nekl-1 / 189769 WormBaseID:WBGene00021461 Length:983 Species:Caenorhabditis elegans


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IKBKBXP_005273547.1 S_TKc 15..290 CDD:214567
STKc_IKK_beta 20..309 CDD:270940
GVQW 785..>805 CDD:290611
nekl-1NP_001293320.1 STKc_Nek 170..423 CDD:270855
ATS1 449..764 CDD:227511
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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