Protein Alignment ap and lhx2a

DIOPT Version :9

• Sequence 1: NP_724428.1
• Gene: ap / 35509
• FlyBaseID: FBgn0267978
• Length: 469
• Species: Drosophila melanogaster
• Sequence 2: XP_017208320.1
• Gene: lhx2a / 795283
• ZFINID: ZDB-GENE-091118-109
• Length: 328
• Species: Danio rerio
• Alignment Length: 341
• Identity: 146/341 - (42%)
• Similarity: 193/341 - (56%)
• Gaps: 53/341 - (15%)

  Fly   134 ESTSDSKITRNLDDCSGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCK 198
            ||.||:.:      |:|||..|.|||||.|.|:|||..||:|.||:..||.|.:|:|:.|:||||
Zfish     5 ESGSDAPV------CAGCGALISDRFYLLAAERRWHERCLKCSACQTDLESELTCFSKHGDIYCK 63

  Fly   199 NDYYS-FFGTRRCSRCLASISSNELVMRARNLVFHVNCFCCTVCHTPLTKGDQYGIIDALIYCRT 262
            .|||| .|.::||:||...||:.|:|||||:||:|::||.|..||..|..||.||:.:..:|||.
Zfish    64 EDYYSRRFSSQRCARCHLGISATEIVMRARDLVYHLSCFSCATCHKVLLTGDHYGMKETSVYCRA 128

  Fly   263 HYSIAREGDTASSSMSATYPYSAQFGSPHNDSSSPHSDPSRSIVPTGIFVPASHVINGLPQPARQ 327
            |.......|...|.||:           ...:|..|:....|.|                    .
Zfish   129 HIQRECHADLYYSDMSS-----------RETNSESHTYDEESPV--------------------H 162

  Fly   328 KGRPRKRK---PKDIEAFTANI-DLNTEYVDFGRGSHLSSSSRTKRMRTSFKHHQLRTMKSYFAI 388
            :.|.|:||   ..|..|::::: ||..:.      |...|..::|||||||||||||:|:|:|..
Zfish   163 RARVRRRKNNSTADHIAYSSDVSDLGVDL------SERVSCQKSKRMRTSFKHHQLRSMQSFFTH 221

  Fly   389 NHNPDAKDLKQLSQKTGLPKRVLQVWFQNARAKWRRMMMKQDGSGLLEKGEGALDLDSISVHSPT 453
            ||||||||||:|:|||||.||||||||||||||:||..:.|:..|:....:.: .|.|.||.||.
Zfish   222 NHNPDAKDLKELAQKTGLTKRVLQVWFQNARAKFRRNCLYQESIGVDNVSDNS-TLTSPSVPSPE 285

  Fly   454 ----SFILGGPNSTPP 465
                |.....|:.|.|
Zfish   286 LCHGSMSPSSPSGTSP 301

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ap	NP_724428.1	LIM1_Lhx2_Lhx9	148..201	CDD:188755	30/52 (58%)
		LIM2_Lhx2_Lhx9	206..264	CDD:188763	28/57 (49%)
		Homeobox	371..424	CDD:395001	43/52 (83%)
lhx2a	XP_017208320.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	85	1.000	Domainoid score	I8129
eggNOG	1	0.900	-	-		E33208_3BD2S
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	297	1.000	Inparanoid score	I2706
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1174930at2759
OrthoFinder	1	1.000	-	-		FOG0002416
OrthoInspector	1	1.000	-	-		otm25706
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR24208
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X1607
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
ZFIN	0	0.000	Not matched by this tool.
	10	9.930