DRSC/TRiP Functional Genomics Resources

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Protein Alignment ap and LOC3291866

DIOPT Version :10

Sequence 1:NP_724428.1 Gene:ap / 35509 FlyBaseID:FBgn0267978 Length:469 Species:Drosophila melanogaster
Sequence 2:XP_061513659.1 Gene:LOC3291866 / 3291866 VectorBaseID:AGAMI1_002622 Length:464 Species:Anopheles gambiae


Alignment Length:487 Identity:278/487 - (57%)
Similarity:331/487 - (67%) Gaps:41/487 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGVCTEERPVMHWQQSARFLGPGAREKSPTPPVAHQGSNQCGSAAGANNNHPLFRACSSSSCPDI 65
            ||||.||||:|||..||||||| .||:||      ..||.|  ...:|||:...|.|  .||.|.
Mosquito     1 MGVCAEERPIMHWHPSARFLGP-PRERSP------DLSNAC--QLNSNNNNLNHRTC--ISCTDT 54

  Fly    66 CDHSTKPFG---------NAYGTESFRSYETADRATFEDSAAKFSISRSRTDCTEVSDETTSGIS 121
            |:||.|..|         :.| .:|..|:|:.||...:  ...:....:|:||::.|....|.|.
Mosquito    55 CEHSLKVAGGNGLLGVNHHLY-ADSCHSFESPDRLIAD--RPNYYADLNRSDCSDSSSVLNSCIQ 116

  Fly   122 FKTEPFGPPSSPESTSDSKITRNLDDCSGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERES 186
            .|:||.|.||||||:::...| .||:|:||...|||||||||||::||||||||..|||.||..:
Mosquito   117 LKSEPPGGPSSPESSNELPST-GLDECAGCDMPIQDRFYLSAVERKWHASCLQCCICRQTLEGAN 180

  Fly   187 SCYSRDGNIYCKNDYYSFFGTRRCSRCLASISSNELVMRARNLVFHVNCFCCTVCHTPLTKGDQY 251
            ||:|||||||||.|||..||:||||:|||||||:|||||||:||||:.||.|.||:|||.|||.|
Mosquito   181 SCFSRDGNIYCKTDYYRVFGSRRCSKCLASISSSELVMRARHLVFHIRCFSCAVCNTPLNKGDHY 245

  Fly   252 GIIDALIYCRTHYSIAREGDTASS--SMSATYPYSAQFGSPHNDSSSPHS--DPSRSIVPTGIFV 312
            .|.|:.::||:|..:..|..|...  .|....||.:|:|      :||.:  .||.|....|...
Mosquito   246 TIRDSAVFCRSHIELPLEAATTPGLPGMPMQCPYQSQYG------TSPVAPLSPSDSTTSGGKLN 304

  Fly   313 PAS----HVINGLPQPARQKGRPRKRKPKDIEAFTANIDLNTEYVDFGRGSHLSSSSRTKRMRTS 373
            ||:    |.:.||||..||||||||||||||||.||::||||||:|.|....|.||||.||||||
Mosquito   305 PATYYPPHGVTGLPQQPRQKGRPRKRKPKDIEAMTASLDLNTEYLDLGFSRGLGSSSRAKRMRTS 369

  Fly   374 FKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQVWFQNARAKWRRMMMKQDGSGL-LEK 437
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||:|..: .:|
Mosquito   370 FKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQVWFQNARAKWRRMMMKQEGKIIDSDK 434

  Fly   438 GEGALDLDSISVHSPTSFILGGPNSTPPLNLD 469
            |:|:||||....|||.|:|:|||.|  |.:||
Mosquito   435 GDGSLDLDGYVSHSPGSYIMGGPGS--PSSLD 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
apNP_724428.1 LIM1_Lhx2_Lhx9 148..201 CDD:188755 38/52 (73%)
LIM2_Lhx2_Lhx9 206..264 CDD:188763 39/57 (68%)
Homeodomain 368..424 CDD:459649 55/55 (100%)
LOC3291866XP_061513659.1 None

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