Protein Alignment ap and lmx1a

DIOPT Version :10

• Sequence 1: NP_724428.1
• Gene: ap / 35509
• FlyBaseID: FBgn0267978
• Length: 469
• Species: Drosophila melanogaster
• Sequence 2: XP_002934210.1
• Gene: lmx1a / 100492433
• XenbaseID: XB-GENE-481569
• Length: 380
• Species: Xenopus tropicalis
• Alignment Length: 312
• Identity: 94/312 - (30%)
• Similarity: 140/312 - (44%)
• Gaps: 62/312 - (19%)

  Fly   148 CSGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYYSFFGTRRCSR 212
            |.||.|.|.|||.|...:..||..|.||..|::||  ||||:.||..:||:|||...|.. :|..
 Frog    35 CEGCERVICDRFLLRISDSLWHEQCAQCCTCKEPL--ESSCFYRDKKLYCRNDYEKLFAV-KCGT 96

  Fly   213 CLASISSNELVMRARNLVFHVNCFCCTVCHTPLTKGDQYGIIDALIYCRTHYSIAREGDTASSSM 277
            ||.:|:.:|.||||:..|:|:.||||.||...|.|||::.:.|..:.|::.|.  ||.|.    :
 Frog    97 CLDTITPSEFVMRAQKNVYHLGCFCCCVCDRQLQKGDEFVLKDGQLLCKSDYE--RERDL----L 155

  Fly   278 SATYPYSAQFGSPHNDSSSPHSDPSRSIVPTGIFVPASHVINGLPQPARQKGRPRKRKPKDIEAF 342
            |...|.::..|...::..:...|.|:.                 |:..:.:.||
 Frog   156 SLVSPAASDSGKSEDEDDAGKFDDSKG-----------------PEDGKDQKRP----------- 192

  Fly   343 TANIDLNTEYVDFGRGSHLSSSSRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLP 407
                                     ||.||.....|.|..|:.|.::..|..|..:.|:.:|||.
 Frog   193 -------------------------KRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLS 232

  Fly   408 KRVLQVWFQNARAKWRRMMMKQDGSGLLEKGEGALDLDSISVHSPTSFILGG 459
            .||:||||||.|||.:::..:|......:..:....:.|...|:.:|..:.|
 Frog   233 VRVVQVWFQNQRAKMKKLARRQQQQQQQQDQQNPSRIPSAQTHNSSSSSVEG 284

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ap	NP_724428.1	LIM1_Lhx2_Lhx9	148..201	CDD:188755	26/52 (50%)
		LIM2_Lhx2_Lhx9	206..264	CDD:188763	23/57 (40%)
		Homeodomain	368..424	CDD:459649	25/55 (45%)
lmx1a	XP_002934210.1	LIM1_Lmx1a	35..86	CDD:188756	26/52 (50%)
		LIM	94..148	CDD:413332	23/53 (43%)
		Homeodomain	193..249	CDD:459649	25/55 (45%)