DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cndp2 and pm20d1.1

DIOPT Version :10

Sequence 1:NP_610181.2 Gene:Cndp2 / 35507 FlyBaseID:FBgn0287767 Length:478 Species:Drosophila melanogaster
Sequence 2:NP_001032448.2 Gene:pm20d1.1 / 553216 ZFINID:ZDB-GENE-051120-102 Length:515 Species:Danio rerio


Alignment Length:520 Identity:112/520 - (21%)
Similarity:185/520 - (35%) Gaps:140/520 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PELSSELQKFFAFVDGKKEDYIGALKTVVGIQSVSAWPEKRGEIGRMVEWTADRLRSLGAETELA 66
            |.||.|          :||..:...|..|.|.:|| :.|....|..:.|:      .|.......
Zfish    56 PYLSPE----------QKEKLLDNFKVAVQIPTVS-FSESDQNITALQEF------DLLLRRVFP 103

  Fly    67 DVGQQTLPNGQIIPLPKVLLGTLGKDPSKKTVLVYGHLDVQPALKEDGWNTNPFELTEVDGKLFG 131
            .|...:|...:::.....|....|.|...:..::..|:||.||.:.|||:..||...|:||.::|
Zfish   104 KVFSSSLVRHEVVGNYSHLFTVAGADAGLEPYMLLAHIDVVPANEADGWDAPPFSAQEIDGFIYG 168

  Fly   132 RGASDDKGPVLCWIHAIEAYQKLNIALPVNVKFVFEGMEE--SGSEG---LDDLLLERKDNFLAD 191
            ||..|:|..|:..:.|:| |.......|....::..|.:|  :|.||   :.:||..|....|..
Zfish   169 RGTIDNKQSVMGILQALE-YLLERGYTPRRTFYIGLGHDEEINGEEGAVKIVNLLKSRGVKLLYV 232

  Fly   192 VD-FVCISDNYWLGKKRPCLTYGLRGLAYFQVEVECSSKDLHSGVFGGTVHEAMPDLCHLLSILV 255
            :| .:.|.|....|...|....|:.......|::..|:...||         :||.....:.||.
Zfish   233 LDEGLTIMDGVVDGLNEPAALIGVSEKGQTTVKLSVSTPPGHS---------SMPPRESSIGILA 288

  Fly   256 DKDTNILVPGVDRDVAPQIKN---EQSIYENIDFEVSEYKKDIGVEQLPHN-GDKTRLLQAR-WR 315
            .     .|..::::..|.:..   |::.:|:                |.|. |...|::.:. |.
Zfish   289 S-----AVARLEKNRMPNLFGHGPERATFEH----------------LAHKFGWSYRMIMSNLWL 332

  Fly   316 YPSLSVHGIEG-----AF---------YEPGAK-TVIPKKVIGKFSIRLVPNQDPKHIEECVVKY 365
            :.||....:||     ||         :..|.| .|:|.......:.|:..:|..:.:...:...
Zfish   333 FSSLLSSVLEGQPDTNAFVRTTTAVTMFNSGVKINVMPAYAEAFVNFRIHSSQTVQEVLNLIEST 397

  Fly   366 LNDKWAERGSPNKMKVTMLSAGKPWT----EDPNHPHYEAAKRAIKHVFNVEPDMTREGGSIPVT 426
            ::||        ::||..::...|..    ||... .|:..|::::.:|   |.:|         
Zfish   398 VSDK--------RVKVEFINGFDPLPISSYEDDTF-GYQIIKKSVQDIF---PQVT--------- 441

  Fly   427 LTLQEATGKNVILVPVGAC--------------------------DDGA--HSQNEKIDIYNYIE 463
                         |..|.|                          .|.|  |..||:|.|.||.|
Zfish   442 -------------VTPGICVANTDSRHYTQLSPDIYRFAPSWYKPGDSARFHGVNERISIQNYEE 493

  Fly   464  463
            Zfish   494  493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cndp2NP_610181.2 M20_dipept_like_CNDP 11..478 CDD:349925 108/511 (21%)
pm20d1.1NP_001032448.2 M20_yscS 67..503 CDD:349923 106/499 (21%)

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