Protein Alignment scaf and CG18754

DIOPT Version :10

• Sequence 1: NP_610180.1
• Gene: scaf / 35505
• FlyBaseID: FBgn0033033
• Length: 655
• Species: Drosophila melanogaster
• Sequence 2: NP_652652.3
• Gene: CG18754 / 59145
• FlyBaseID: FBgn0042106
• Length: 341
• Species: Drosophila melanogaster
• Alignment Length: 348
• Identity: 79/348 - (22%)
• Similarity: 131/348 - (37%)
• Gaps: 74/348 - (21%)

  Fly   342 AKCASALVCTSENFCNAIGVLSETPVELSPMEAAFRVPLTDCLQTENGSPGKCCRDPNYVDPWPV 406
            |:|.....|..:..|..:       |..||:....|.......:.:..:..:|..|||..:  .:
  Fly    22 AECVRLSSCQKDEKCTRL-------VSCSPLMNILRPRGMTQAEKDVFAHRQCGLDPNGHE--LL 77

  Fly   407 NLAGVCATR------NKRT--------KPTGVKDLDANFAEIPWQAMILRESSKTLICGGAIIGD 457
            ::..||...      ||:|        :..|.::.:.|  |.||..::|.|:..:||
  Fly    78 HMVYVCCPELGDVLPNKQTCGQTTPVFRDRGAENAELN--EYPWMVLLLYENRLSLI-------- 132

  Fly   458 QFVLSSASCV-------NGLPVTDIRVKAGEWELGSTNEPLPFQLTGVKTVDVHPDYDPS--TNS 513
            ::||::|.||       |.|.:..:|:.....:..::....|.....|....||..:..|  |..
  Fly   133 RYVLTAAHCVIGGYLTQNDLVLKSVRLGESTTDCITSESRCPHLDVEVGQTTVHQGFTSSGGTYR 197

  Fly   514 HDLAIIRLERRLEFASHIQPICISD-EDPKDSEQCFTSGW----GKQALSIHEEGALMHVTDTLP 573
            :|:|::||:..:.:...|||||:.| |.|........|||    ..|.|          :|.|:.
  Fly   198 NDIALLRLQFPVRYTKKIQPICLLDAEFPLQDLNLQISGWDPTKSSQTL----------ITSTVK 252

  Fly   574 QAR-SEC------SADSSSVCSA--TKFDSCQFDVGSALACGSGSSVRLKGIFAGENSCGEGQTV 629
            :.. ::|      ...:|.||:.  .|.|:|....||.:....||.|......||..|.|:....
  Fly   253 ERNPADCLNRYPSFRSASQVCAGGQRKGDTCAGISGSPVMGIMGSGVDEFVFLAGIASYGQQYCY 317

  Fly   630 RFAKPDI--------KWINTAFA 644
            ....|.:        :||....|
  Fly   318 SAGIPGVYTKIGHFSEWIKANLA 340

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scaf	NP_610180.1	Atrophin-1	<63..>338	CDD:460830
		CLIP_SPH_Scar	343..408	CDD:465747	11/64 (17%)
		Tryp_SPc	428..616	CDD:238113	53/210 (25%)
CG18754	NP_652652.3	CLIP	36..84	CDD:463440	10/56 (18%)
		Tryp_SPc	108..338	CDD:238113	61/249 (24%)