Protein Alignment scaf and Jon99Fi

DIOPT Version :10

• Sequence 1: NP_610180.1
• Gene: scaf / 35505
• FlyBaseID: FBgn0033033
• Length: 655
• Species: Drosophila melanogaster
• Sequence 2: NP_651800.2
• Gene: Jon99Fi / 43622
• FlyBaseID: FBgn0039778
• Length: 267
• Species: Drosophila melanogaster
• Alignment Length: 278
• Identity: 65/278 - (23%)
• Similarity: 103/278 - (37%)
• Gaps: 61/278 - (21%)

  Fly   406 VNLAGVCATRNKRTKPTGVKDL----------DANFAEIPWQAMILRESSKTLICGGAIIGDQFV 460
            |..|....|..::..||.|||:          .|...::|:...:|...:....|||:|||:.:|
  Fly    11 VAAATAIPTPEQKLVPTPVKDVKIQGRITNGYPAYEGKVPYIVGLLFSGNGNWWCGGSIIGNTWV 75

  Fly   461 LSSASCVNGLPVTDIRVKAGEWELGSTNEPLPFQLTGVKTVDVHPDYDPSTNSHDLAIIR----- 520
            |::|.|.||.....|...|     ...|:|......|......|..|:.....:|:::||
  Fly    76 LTAAHCTNGASGVTINYGA-----SLRNQPQYTHWVGSGNFVQHHHYNSGNLHNDISLIRTPHVD 135

  Fly   521 ---LERRLEFASHIQPICISDEDPKDSEQCF------TSGWGKQALSIHEEGAL---MHVTDTLP 573
               |..::|..|:           .|..|.:      .||||    ..::...|   :...|...
  Fly   136 FWHLVNKVELPSY-----------NDRYQDYAGWWAVASGWG----GTYDGSPLPDWLQAVDVQI 185

  Fly   574 QARSEC----SADSSSVCSATK--FDSCQFDVGSALACGSGSSVRLKGI--FAGENSCGEGQTVR 630
            .::|:|    |...:.:|..|.  ..:|..|.|..|....|:  ||.|:  |.....|..|....
  Fly   186 MSQSDCSRTWSLHDNMICINTNGGKSTCGGDSGGPLVTHEGN--RLVGVTSFVSSAGCQSGAPAV 248

  Fly   631 FAKPD--IKWI--NTAFA 644
            |::..  :.||  ||..:
  Fly   249 FSRVTGYLDWIRDNTGIS 266

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scaf	NP_610180.1	Atrophin-1	<63..>338	CDD:460830
		CLIP_SPH_Scar	343..408	CDD:465747	1/1 (100%)
		Tryp_SPc	428..616	CDD:238113	48/210 (23%)
Jon99Fi	NP_651800.2	Tryp_SPc	38..262	CDD:238113	55/245 (22%)