Protein Alignment scaf and CG11841

DIOPT Version :10

• Sequence 1: NP_610180.1
• Gene: scaf / 35505
• FlyBaseID: FBgn0033033
• Length: 655
• Species: Drosophila melanogaster
• Sequence 2: NP_651661.1
• Gene: CG11841 / 43430
• FlyBaseID: FBgn0039628
• Length: 319
• Species: Drosophila melanogaster
• Alignment Length: 278
• Identity: 65/278 - (23%)
• Similarity: 103/278 - (37%)
• Gaps: 74/278 - (26%)

  Fly   419 TKPTGVKDLDANFAEIPWQAMILRESSKTLI---CGGAIIGDQFVLSSASC-------VNGLPVT 473
            ::|..|....|...|.|:.|.:....:...|   |||.:|.::.||::|.|       ||
  Fly    68 SRPLIVDGTPAEPKEFPFAARLGHRKTNNEIKWFCGGTLISNRLVLTAAHCFFSEHGEVN----- 127

  Fly   474 DIRVKAGEWELGSTN---EPLPFQLTGVKTVDVHPDYDPSTNSHDLAIIRLERRLEFASHIQPIC 535
              .|:.||.|..:..   ||..|   ||..:..||.::.....:|:.|::|:|.::|..:..|.|
  Fly   128 --VVRLGELEFDTDTDDAEPEDF---GVLALKAHPGFENPQLYNDIGIVQLDREVKFNRYKHPAC 187

  Fly   536 ISDEDPKDSEQCFTSGWGKQALSIHEEGALMHV---------------TDTLPQARSECSADSSS 585
            :..:|.:..|.....|||::..:..|...|:.|               .|.||....    ..|.
  Fly   188 LPFDDGEQHESFIAIGWGQKKFAQKESKKLLKVQLQGYKDRCVSSVDANDELPNGYE----PKSQ 248

  Fly   586 VC--SATKFDSCQFDVGSA-------LACGSGSSVRLKGIFAGENSCGEGQTVRFAKPDI----- 636
            :|  |....|:|..|.|..       |||    ...:.||.:...:|        :.|||
  Fly   249 LCIGSRDNKDTCNGDSGGPVLAYHKDLAC----MYHVMGITSAGITC--------STPDIPSAYT 301

  Fly   637 ------KWINTAFAENNK 648
                  .||....|:..:
  Fly   302 RVHYFLNWIKGELAKQTQ 319

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scaf	NP_610180.1	Atrophin-1	<63..>338	CDD:460830
		CLIP_SPH_Scar	343..408	CDD:465747
		Tryp_SPc	428..616	CDD:238113	54/224 (24%)
CG11841	NP_651661.1	Tryp_SPc	72..311	CDD:238113	62/264 (23%)