DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scaf and SPE

DIOPT Version :9

Sequence 1:NP_610180.1 Gene:scaf / 35505 FlyBaseID:FBgn0033033 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_651168.1 Gene:SPE / 42791 FlyBaseID:FBgn0039102 Length:400 Species:Drosophila melanogaster


Alignment Length:372 Identity:83/372 - (22%)
Similarity:146/372 - (39%) Gaps:109/372 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   331 TPQPANVPKHFAKCASALVCTSENFCNAIGVLSETPVELSPMEAAFRVPLTDCLQTENGSPGKCC 395
            |||.::   ...:|.....|  ....|.:.|..:||.:        |:.|         |..:|.
  Fly    36 TPQQSD---ERGQCVHITSC--PYLANLLMVEPKTPAQ--------RILL---------SKSQCG 78

  Fly   396 RDPNYVDPWPVNLAGVCATRNKR-----TKPT-GVKD-------LDAN------FA--------- 432
            .| |.|:.. ||...||..::.|     ::|| ..:|       |..|      ||         
  Fly    79 LD-NRVEGL-VNRILVCCPQSMRGNIMDSEPTPSTRDALQQGDVLPGNDVCGFLFADRIFGGTNT 141

  Fly   433 ---EIPWQAMI----LRESSKTLICGGAIIGDQFVLSSASCV-------NGLPVTDIRVKAGEWE 483
               |.||..::    |...:.|..||||::..::||::..|:       :|..:..:|:  |||:
  Fly   142 TLWEFPWMVLLQYKKLFSETYTFNCGGALLNSRYVLTAGHCLASRELDKSGAVLHSVRL--GEWD 204

  Fly   484 LGSTNEPLPFQLTG-----VKTVD-------VHPDYDPST--NSHDLAIIRLERRLEFASHIQPI 534
            . .|:.....|:.|     .|.:|       :|..|.|::  ..:|:|::||:|.:.:..:::||
  Fly   205 T-RTDPDCTTQMNGQRICAPKHIDIEVEKGIIHEMYAPNSVDQRNDIALVRLKRIVSYTDYVRPI 268

  Fly   535 CISDEDPKDS--EQCF------TSGWG------KQALSIHEEGALMHVTDTLPQARS-ECSADSS 584
            |:    |.|.  :..|      .:|||      ..|:.:.....:.::|....:..| :...|.|
  Fly   269 CL----PTDGLVQNNFVDYGMDVAGWGLTENMQPSAIKLKITVNVWNLTSCQEKYSSFKVKLDDS 329

  Fly   585 SVCSATKF--DSCQFDVGSAL----ACGSGSSVRLKGIFA-GENSCG 624
            .:|:..:.  |:|..|.|..|    :.|......:.|:.: |...||
  Fly   330 QMCAGGQLGVDTCGGDSGGPLMVPISTGGRDVFYIAGVTSYGTKPCG 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scafNP_610180.1 FtsK <198..>334 CDD:332908 2/2 (100%)
Tryp_SPc 428..616 CDD:238113 54/251 (22%)
SPENP_651168.1 CLIP 42..94 CDD:314844 16/72 (22%)
Tryp_SPc 135..397 CDD:238113 55/249 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45435495
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.