Protein Alignment scaf and CG7542

DIOPT Version :10

• Sequence 1: NP_610180.1
• Gene: scaf / 35505
• FlyBaseID: FBgn0033033
• Length: 655
• Species: Drosophila melanogaster
• Sequence 2: NP_648995.3
• Gene: CG7542 / 39960
• FlyBaseID: FBgn0036738
• Length: 270
• Species: Drosophila melanogaster
• Alignment Length: 276
• Identity: 62/276 - (22%)
• Similarity: 111/276 - (40%)
• Gaps: 37/276 - (13%)

  Fly   392 GKCCRDPNYVDPWPVNLAGVCATRNKRTKPTGVKDLDANFAEIPWQA-MILRESSKTLICGGAII 455
            |.|...|...|..|....|         :|       |...:.|:|| :.:...:.:..|||.:|
  Fly    12 GSCTAVPLLTDVEPYITNG---------EP-------AEVGQFPYQAGLNVSFGNWSTWCGGTLI 60

  Fly   456 GDQFVLSSASCVNGLPVTDIRVKAGEWELGSTNEPLPFQLTGVKT-VDVHPDYDPSTNSHDLAII 519
            ...:::::|.|::|  ...:.|..|...:|..:|....::...|: :.||.:|..||..:|:::|
  Fly    61 SHYWIITAAHCMDG--AESVTVYLGAINIGDESEEGQERIMVEKSGIIVHSNYMASTVVNDISLI 123

  Fly   520 RLERRLEFASHIQ----PICISDEDPK-DSEQCFTSGWGKQALSIHEEGALMHVTDTLPQARSEC 579
            ||...:.|...|:    |..::.:.|. :|.:.|.||||:::.:......::...:......|.|
  Fly   124 RLPAFVGFTDRIRAASLPRRLNGQFPTYESIRAFASGWGRESDASDSVSPVLRYVEMPIMPHSLC 188

  Fly   580 ------SADSSSVCSATKF--DSCQFDVGSALACGSGSSVRLKG--IFAGENSCGEGQTVRFAKP 634
                  :.....:|.:|..  .:|..|.|..|....|:|..|.|  .|.....|..|....|.:.
  Fly   189 RMYWSGAVSEKMICMSTTSGKSTCHGDSGGPLVYKQGNSSYLIGSTSFGTSMGCQVGFPAVFTRI 253

  Fly   635 D--IKWINTAFAENNK 648
            .  :.||......:||
  Fly   254 SSYLDWILNHIIAHNK 269

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scaf	NP_610180.1	Atrophin-1	<63..>338	CDD:460830
		CLIP_SPH_Scar	343..408	CDD:465747	5/15 (33%)
		Tryp_SPc	428..616	CDD:238113	47/204 (23%)
CG7542	NP_648995.3	Tryp_SPc	27..263	CDD:238113	55/253 (22%)