DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scaf and CG11529

DIOPT Version :10

Sequence 1:NP_610180.1 Gene:scaf / 35505 FlyBaseID:FBgn0033033 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_648558.1 Gene:CG11529 / 39395 FlyBaseID:FBgn0036264 Length:287 Species:Drosophila melanogaster


Alignment Length:181 Identity:44/181 - (24%)
Similarity:82/181 - (45%) Gaps:23/181 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   433 EIPWQAMILRES--SKTLICGGAIIGDQFVLSSASCVNGLPVTDIRVKAGEWELGSTNEPLPFQL 495
            :.|:|.|::.:.  .|.::|||.::..:::|::..|..|  ||...|..|...:..|.......|
  Fly    40 KFPYQVMLIGKQLWRKRILCGGTLLDKRWILTAGHCTMG--VTHYDVYLGTKSVEDTEVSGGLVL 102

  Fly   496 TGVKTVDVHPDYDPSTNSHDLAIIRLERRLEFASHIQPICISD---EDPKDSEQCFTSGWGKQAL 557
            ...|.: ||..::|.|.::|:|:::|.:.:.|...|||..:..   .|.........|||     
  Fly   103 RSNKFI-VHERFNPETAANDIALVKLPQDVAFTPRIQPASLPSRYRHDQFAGMSVVASGW----- 161

  Fly   558 SIHEEGALMHVTDTLPQARSECSADSSSVCSATKFDSCQFDVGSALACGSG 608
                 ||::.:|::.....:|....|::.| |.::|.    |.|.:.|..|
  Fly   162 -----GAMVEMTNSDSMQYTELKVISNAEC-AQEYDV----VTSGVICAKG 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scafNP_610180.1 Atrophin-1 <63..>338 CDD:460830
CLIP_SPH_Scar 343..408 CDD:465747
Tryp_SPc 428..616 CDD:238113 44/181 (24%)
CG11529NP_648558.1 Tryp_SPc 37..258 CDD:238113 44/181 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.