DRSC/TRiP Functional Genomics Resources

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Protein Alignment scaf and CG33465

DIOPT Version :10

Sequence 1:NP_610180.1 Gene:scaf / 35505 FlyBaseID:FBgn0033033 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_001033950.2 Gene:CG33465 / 3885587 FlyBaseID:FBgn0053465 Length:488 Species:Drosophila melanogaster


Alignment Length:181 Identity:43/181 - (23%)
Similarity:78/181 - (43%) Gaps:30/181 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   435 PWQAMILRESSKTLICGGAIIGDQFVLSSASCVNGLPVTDIRVKAGEW-ELGSTNEPLPFQLTGV 498
            ||.|.|.:.:.  .||.|.::...|||::|||::  ..:.:.|..|.: :....::....:..||
  Fly    46 PWMASIYKNNQ--FICDGTLVHKLFVLTAASCIS--KDSQLYVLFGMYNQYRDASQFFNNEQYGV 106

  Fly   499 KTVDVHPDYDPSTNSHDLAIIRLERRLEFASHIQPIC-ISDEDPKDS--EQCFTSGWGKQA---- 556
            .....|.::.|:...:|:.::||...:...:||:||| |.|...|.:  |:....||.:|.    
  Fly   107 AVALQHSNFRPNNGVNDIGLLRLYGEVTHYAHIRPICIILDHVVKSAPFERFEGFGWQQQGTEAS 171

  Fly   557 --------------LSIHEEGALMHVTD----TLPQARSECSADSSSVCSA 589
                          ...|..|.|:.:.:    ...:.||.|.::|.|..:|
  Fly   172 SQVRQTVYLSQKKPFECHRNGQLLPINEGQFCAGNRDRSFCRSNSGSPLTA 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scafNP_610180.1 Atrophin-1 <63..>338 CDD:460830
CLIP_SPH_Scar 343..408 CDD:465747
Tryp_SPc 428..616 CDD:238113 43/181 (24%)
CG33465NP_001033950.2 Tryp_SPc 46..264 CDD:238113 43/181 (24%)
Tryp_SPc 293..481 CDD:473915
Blue background indicates that the domain is not in the aligned region.

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