DRSC/TRiP Functional Genomics Resources

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Protein Alignment scaf and CG10469

DIOPT Version :10

Sequence 1:NP_610180.1 Gene:scaf / 35505 FlyBaseID:FBgn0033033 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_648025.1 Gene:CG10469 / 38696 FlyBaseID:FBgn0035678 Length:267 Species:Drosophila melanogaster


Alignment Length:255 Identity:58/255 - (22%)
Similarity:102/255 - (40%) Gaps:69/255 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   429 ANFAEIPWQAMIL--RESSK--TLICGGAIIGDQFVLSSASCVNGLPVTDIRVKAGEWELGSTNE 489
            |...::|:|..:|  .|.||  ..:|||.|:.:::::::|.|:..       .|:..|:      
  Fly    30 AKAKQLPYQVGLLCYFEGSKDEPNMCGGTILSNRWIITAAHCLQD-------PKSNLWK------ 81

  Fly   490 PLPFQLTGVKTVD------------VHPDYDPSTNSHDLAIIRLERRLEFASHIQPICI-SDEDP 541
             :...:..||:.|            ||..:|..|.::|:|:|:|.::|.|..:|||..: |.:..
  Fly    82 -VLIHVGKVKSFDDKEIVVNRSYTIVHKKFDRKTVTNDIALIKLPKKLTFNKYIQPAKLPSAKKT 145

  Fly   542 KDSEQCFTSGWGKQALSIHEEGALMHVTDTLPQARSECS--------------ADSSSVC-SATK 591
            ....:...||||.....:..: .|.::...: .:..||.              ..:..:| .:.|
  Fly   146 YTGRKAIISGWGLTTKQLPSQ-VLQYIRAPI-ISNKECERQWNKQLGGKSKKVVHNGFICIDSKK 208

  Fly   592 FDSCQFDVGSALACGSGSSVRLKGI----FAGENSCGEGQTVRFAKPDI--------KWI 639
            ...|:.|.|..:....||.. |.||    |.||  |      :...||:        |||
  Fly   209 GLPCRGDSGGPMVLDDGSRT-LVGIVSHGFDGE--C------KLKLPDVSTRVSSYLKWI 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scafNP_610180.1 Atrophin-1 <63..>338 CDD:460830
CLIP_SPH_Scar 343..408 CDD:465747
Tryp_SPc 428..616 CDD:238113 47/218 (22%)
CG10469NP_648025.1 Tryp_SPc 23..259 CDD:214473 56/253 (22%)
Blue background indicates that the domain is not in the aligned region.

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