DRSC/TRiP Functional Genomics Resources

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Protein Alignment scaf and CG10472

DIOPT Version :10

Sequence 1:NP_610180.1 Gene:scaf / 35505 FlyBaseID:FBgn0033033 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_648017.1 Gene:CG10472 / 38688 FlyBaseID:FBgn0035670 Length:290 Species:Drosophila melanogaster


Alignment Length:225 Identity:64/225 - (28%)
Similarity:100/225 - (44%) Gaps:38/225 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   422 TGVKDLDANFAEIPWQ-AMILRESSKTLICGGAIIGDQFVLSSASCVNGLPVTDIRVKAGEWELG 485
            ||.:..:.|  :.|:| .::|..:.....|||.||.|::::::|.|.:.| .|.:.|..|..:..
  Fly    48 TGGQIAEPN--QFPYQVGLLLYITGGAAWCGGTIISDRWIITAAHCTDSL-TTGVDVYLGAHDRT 109

  Fly   486 STNE---PLPFQLTGVKTVDVHPDYDPSTNSHDLAIIRLERRLEFASHIQPICISDEDPKDS--- 544
            :..|   .:.|..|  |.|.||.|:...|.::|:::|:|...:||..:|||..:..:....|   
  Fly   110 NAKEEGQQIIFVET--KNVIVHEDWIAETITNDISLIKLPVPIEFNKYIQPAKLPVKSDSYSTYG 172

  Fly   545 -EQCFTSGWGKQALSIHEEGALMHVTDTLPQA------RSECS------ADSSSVCSATK--FDS 594
             |....|||||  :|....||    ||.|..|      .|.||      ..:|::|..|.  ..:
  Fly   173 GENAIASGWGK--ISDSATGA----TDILQYATVPIMNNSGCSPWYFGLVAASNICIKTTGGIST 231

  Fly   595 CQFDVGSALACGSGSSVRLKGIFAGENSCG 624
            |..|.|..|....||:..:     |..|.|
  Fly   232 CNGDSGGPLVLDDGSNTLI-----GATSFG 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scafNP_610180.1 Atrophin-1 <63..>338 CDD:460830
CLIP_SPH_Scar 343..408 CDD:465747
Tryp_SPc 428..616 CDD:238113 59/209 (28%)
CG10472NP_648017.1 Tryp_SPc 46..279 CDD:214473 64/225 (28%)
Blue background indicates that the domain is not in the aligned region.

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