DRSC/TRiP Functional Genomics Resources

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Protein Alignment scaf and Jon65Aii

DIOPT Version :9

Sequence 1:NP_610180.1 Gene:scaf / 35505 FlyBaseID:FBgn0033033 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_648014.1 Gene:Jon65Aii / 38684 FlyBaseID:FBgn0035666 Length:259 Species:Drosophila melanogaster


Alignment Length:244 Identity:56/244 - (22%)
Similarity:93/244 - (38%) Gaps:70/244 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   420 KPTGVKDLDAN--------------FAEIPWQAMILRESSK--TLICGGAIIGDQFVLSSASCVN 468
            :|..|||:.|.              ..::|:...:..::..  ...|||:|||.::||::|.|..
  Fly    20 RPVPVKDMPAGNKINGRITNGYPAYEGKVPYIVALRFDNGNGGGWYCGGSIIGHEWVLTAAHCTY 84

  Fly   469 GLPVTDIRVKAGEWELGSTNEPLPFQLTGVKTVDVHPDYDPSTNSHDLAIIRLERRLEFASHIQP 533
            |.....|...| .|.    .:|   |.|...|.::|         :|:|:||.. .::|.|.:..
  Fly    85 GASYVTISYGA-VWR----QQP---QFTHYDTGNLH---------NDIALIRTP-HVDFWSLVNK 131

  Fly   534 ICISDEDPKDSEQ--------CFTSGWGKQALSIHEEGALMHVTDTLPQARSECSAD-------- 582
            :    |.|:..::        ...||||..:.|       ..:||.|.....:.|.:        
  Fly   132 V----ELPRYDDRYNNFYGWWALLSGWGSSSDS-------SGMTDYLNCVDIQISDNSVCLDYYG 185

  Fly   583 -----SSSVCSATKFD--SCQFDVGSALACGSGSSVRLKGIFAGENSCG 624
                 |:.:|.||..:  ||..|.|..|....|:  |..||.:..::.|
  Fly   186 SHYITSNHLCYATPENKGSCSGDSGGPLVLHDGN--RQVGIVSFGSAAG 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scafNP_610180.1 FtsK <198..>334 CDD:332908
Tryp_SPc 428..616 CDD:238113 49/226 (22%)
Jon65AiiNP_648014.1 Tryp_SPc 36..251 CDD:214473 51/228 (22%)
Tryp_SPc 37..254 CDD:238113 51/227 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45435383
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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