DRSC/TRiP Functional Genomics Resources

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Protein Alignment scaf and sphe

DIOPT Version :9

Sequence 1:NP_610180.1 Gene:scaf / 35505 FlyBaseID:FBgn0033033 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_573148.2 Gene:sphe / 32648 FlyBaseID:FBgn0030774 Length:249 Species:Drosophila melanogaster


Alignment Length:255 Identity:64/255 - (25%)
Similarity:104/255 - (40%) Gaps:43/255 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   410 GVCATRNKRTKPTGVKDLDANFAEIPWQAMILRESSKTLICGGAIIGDQFVLSSASCV--NGLPV 472
            |:|   :.:.:..|.:|.||..........:    ....:|||:|:....:|::|.||  :|..:
  Fly    18 GMC---HAQGRIMGGEDADATATTFTASLRV----DNAHVCGGSILSQTKILTTAHCVHRDGKLI 75

  Fly   473 TDIRVKAGEWELGSTNEPLPFQLTGVKTVDVHPDYDPSTNSHDLAIIRLERRLEFASHIQ--PIC 535
            ...|:..   .:||||:....::..|::|.|||||....|  :||:|.|...|.:...|.  |:.
  Fly    76 DASRLAC---RVGSTNQYAGGKIVNVESVAVHPDYYNLNN--NLAVITLSSELTYTDRITAIPLV 135

  Fly   536 ISDED-PKDSEQCFTSGWGK-----QALSIHEEGALMHVTDTLPQARSECSADSSSVCSA--TKF 592
            .|.|. |.:..:...:|||:     .:..|.:....:....|...|.|:  .|..|.|.|  .|.
  Fly   136 ASGEALPAEGSEVIVAGWGRTSDGTNSYKIRQISLKVAPEATCLDAYSD--HDEQSFCLAHELKE 198

  Fly   593 DSCQFDVGSALACGSGSSVRLKGIFAGENSCGEGQTVRFAKPDI--------KWINTAFA 644
            .:|..|.|.....|: :.:.|.....|  :||.    |:  ||:        .||....|
  Fly   199 GTCHGDGGGGAIYGN-TLIGLTNFVVG--ACGS----RY--PDVFVRLSSYADWIQEQIA 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scafNP_610180.1 FtsK <198..>334 CDD:332908
Tryp_SPc 428..616 CDD:238113 51/199 (26%)
spheNP_573148.2 Tryp_SPc 42..247 CDD:238113 57/224 (25%)
Tryp_SPc 42..244 CDD:214473 55/221 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45435410
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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