DRSC/TRiP Functional Genomics Resources

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Protein Alignment scaf and CG11664

DIOPT Version :10

Sequence 1:NP_610180.1 Gene:scaf / 35505 FlyBaseID:FBgn0033033 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_569865.1 Gene:CG11664 / 31033 FlyBaseID:FBgn0040341 Length:254 Species:Drosophila melanogaster


Alignment Length:226 Identity:48/226 - (21%)
Similarity:82/226 - (36%) Gaps:54/226 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   428 DANFAEIPWQ----AMILRESSKTLICGGAIIGDQFVLSSASCV--NGLPVTDIRVKAG----EW 482
            ||....||.|    ..:::......:..|::...::||:.|.|.  |..| .::.|:||    .|
  Fly    21 DALHRGIPVQQQNYGYVMQIYGPQFLAAGSLFSARYVLTVAHCFKKNTKP-EELSVRAGYRWIAW 84

  Fly   483 ELGSTNEPLPFQLTGVKTVDVHPDYDPSTNSHDLAIIRLERRLEFASHIQPICISDEDPKDSEQC 547
            |....      |:.|:..   ||.:.|.|..:|:|::|::..:..:..|..|.:... |......
  Fly    85 EFRGK------QVAGLLR---HPKFSPLTLRNDIAVLRVKAAISHSHMINYIGLCSR-PLTPLNM 139

  Fly   548 FT-----SGWGKQALSIHEEGALMHVTDTLPQARSECSADSSS-----------VC-SATKFDS- 594
            |.     :||.           |||:...|.....:...:.:.           :| |||..:. 
  Fly   140 FAPPQELAGWN-----------LMHIAQPLKSMSVQVEPEKNCRQWFPQISGGVICASATMGEGL 193

  Fly   595 CQFDVGSALACGSGSSVRLKGIFAGENSCGE 625
            |..|.|..|..|.    .:.|:......||:
  Fly   194 CYGDSGDPLISGG----EVCGLAIAFRKCGD 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scafNP_610180.1 Atrophin-1 <63..>338 CDD:460830
CLIP_SPH_Scar 343..408 CDD:465747
Tryp_SPc 428..616 CDD:238113 45/215 (21%)
CG11664NP_569865.1 Tryp_SPc 38..239 CDD:473915 43/209 (21%)
Blue background indicates that the domain is not in the aligned region.

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