DRSC/TRiP Functional Genomics Resources

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Protein Alignment scaf and Erasp

DIOPT Version :10

Sequence 1:NP_610180.1 Gene:scaf / 35505 FlyBaseID:FBgn0033033 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_725487.1 Gene:Erasp / 246448 FlyBaseID:FBgn0050090 Length:291 Species:Drosophila melanogaster


Alignment Length:244 Identity:67/244 - (27%)
Similarity:108/244 - (44%) Gaps:33/244 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   428 DANFAEIPWQAMILRESSKTLICGGAIIGDQFVLSSASCVNGLPVTDIRVKAGEWELGST---NE 489
            ||.....||.|.|  .||..|||||.:|..:|||::|.|||  ..:.::|:.||::..:|   |.
  Fly    45 DAIINSNPWMAYI--HSSVKLICGGTLITQRFVLTAAHCVN--EGSAVKVRLGEYDDTATEDCNS 105

  Fly   490 PLPFQLTGVKTVDV---HPDYDPSTNSHDLAIIRLERRLEFASHIQPICI----SDEDPKDSEQC 547
            .:.........||:   |..:....|.:|:|::||.:.:.|.:||.||||    |..:..||.:.
  Fly   106 KICIPRAEEHDVDMAFRHGKFSEIKNLNDIALLRLAKFVTFKAHISPICIILGTSKRELVDSIEW 170

  Fly   548 F-TSGWGKQALSIHEEGALMHVTDTLPQARSECS------ADSSSVCSA-TKFDSCQFDVGSALA 604
            | .:|||:  ...|....::.:|.......|:|.      ...:.:|:. ...|:|..|.|..|.
  Fly   171 FVATGWGE--TRTHRTRGVLQITQLQRYNSSQCMQALGRLVQQNQICAGRLGSDTCNGDSGGPLF 233

  Fly   605 CGSGSSVRLKGIFAGENSCGEGQ-------TVRFAKPDIKWINTAFAEN 646
            .......:::.:..|..|.|..:       |..::..|  ||.|...:|
  Fly   234 QTVRHMDKMRPVQFGVVSYGSRECSGIGVYTDVYSYAD--WIATVVQQN 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scafNP_610180.1 Atrophin-1 <63..>338 CDD:460830
CLIP_SPH_Scar 343..408 CDD:465747
Tryp_SPc 428..616 CDD:238113 58/205 (28%)
EraspNP_725487.1 Tryp_SPc 40..276 CDD:238113 65/238 (27%)
Blue background indicates that the domain is not in the aligned region.

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