Protein Alignment scaf and CG30088

DIOPT Version :10

• Sequence 1: NP_610180.1
• Gene: scaf / 35505
• FlyBaseID: FBgn0033033
• Length: 655
• Species: Drosophila melanogaster
• Sequence 2: NP_725488.3
• Gene: CG30088 / 246447
• FlyBaseID: FBgn0050088
• Length: 281
• Species: Drosophila melanogaster
• Alignment Length: 280
• Identity: 67/280 - (23%)
• Similarity: 108/280 - (38%)
• Gaps: 59/280 - (21%)

  Fly   399 NYVDPWPVNLAGVCATRNKRTKPTGVKDLDANFAEIPWQAMILRESSKTLICGGAIIGDQFVLSS 463
            |::.|    ..||....|..|:.  |:..:|.....|:.|.:...|.  :.|||.||..:::|::
  Fly    27 NFLIP----SCGVSYESNVATRI--VRGKEAMLKSAPFMAYLYYSSE--IHCGGTIISSRYILTA 83

  Fly   464 ASCVNGLPVTDIRVKAGEWEL--------GSTNEPL-PFQL---TGVKTVDVHPDYDPSTNSHDL 516
            |.|:...    ::|:.||.::        ||.:.|. .|.:   |..|..|       ...::|:
  Fly    84 AHCMRPY----LKVRLGEHDITRNPDCQGGSCSPPAEEFDIVLATKYKRFD-------RFLANDI 137

  Fly   517 AIIRLERRLEFASHIQPICI---SDEDPKDSE-QCFTSGWGKQALSIHEEGALMHVTDTLPQARS 577
            |:::|.|.:.|..||||||:   ....|...| |.|  ||| |..:.|....|.....|....|
  Fly   138 ALLKLSRNIRFNVHIQPICLILNPAAAPNVHEFQAF--GWG-QTETNHSANVLQTTVLTRYDNR- 198

  Fly   578 ECSADSSSVCSATKF-------DSCQFDVGSALACGSGSSVRLKGIFA---------GENSCGEG 626
            .|.:..|...:..:.       |:|..|.|..|.    :.|...|::.         |::.|...
  Fly   199 HCRSVLSMPITINQLCVGFQGSDTCSGDSGGPLV----TKVNYDGVWRYLQLGIVSFGDDKCQSP 259

  Fly   627 QTVRFAKPDIKWINTAFAEN 646
            ....:....|:||......|
  Fly   260 GVYTYVPNYIRWIRYVMQSN 279

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scaf	NP_610180.1	Atrophin-1	<63..>338	CDD:460830
		CLIP_SPH_Scar	343..408	CDD:465747	2/8 (25%)
		Tryp_SPc	428..616	CDD:238113	53/210 (25%)
CG30088	NP_725488.3	Tryp_SPc	45..273	CDD:238113	59/250 (24%)