Protein Alignment scaf and CG43335

DIOPT Version :10

• Sequence 1: NP_610180.1
• Gene: scaf / 35505
• FlyBaseID: FBgn0033033
• Length: 655
• Species: Drosophila melanogaster
• Sequence 2: NP_001247121.1
• Gene: CG43335 / 12798413
• FlyBaseID: FBgn0263040
• Length: 281
• Species: Drosophila melanogaster
• Alignment Length: 318
• Identity: 81/318 - (25%)
• Similarity: 120/318 - (37%)
• Gaps: 83/318 - (26%)

  Fly   374 AAFRVPLTDCLQTENGSPGKCCR-------DPNYVDPWPVNLAGVCATRN----KRTKPTGVKDL 427
            |||.|.::.|..        .||       :||            |..|.    .||:..|  ..
  Fly     4 AAFLVIISVCQW--------LCRFGESRLLEPN------------CGIRTMPSFHRTRIIG--GS 46

  Fly   428 DANFAEIPWQAMILRESSKTLICGGAIIGDQFVLSSASCVNGLPVTDIRVKAGEWELGSTNEPLP 492
            ||.....||.|.:..|..  ..|.|.:|.:||||::|.|:..  ..::.|:.|...|..::..:
  Fly    47 DAEITSHPWMAYLYNEFH--YFCAGTLITNQFVLTAAHCIEA--SKNLTVRLGGSGLTRSDGSM- 106

  Fly   493 FQLT----GVKTVDVHPDYDPSTNSHDLAIIRLERRLEFASHIQPICISDEDP------KDSEQC 547
            .|:|    .|.....|..:.||...:|:|:|||.|.::|..||:||||. .||      :|....
  Fly   107 CQITAEDYSVSMAIKHKYFTPSIMLNDIAMIRLARTVKFYDHIRPICII-LDPAVRLLLEDGMTL 170

  Fly   548 FTSGWGKQALSIHEEGALMHVTDTLP---QARSECS------ADSSSVCSATK-FDSCQFDVGSA 602
            ..:|||.....:|.     |:....|   ..|:.||      .....:|:..| .::|..|.|..
  Fly   171 MATGWGLADKRMHP-----HLLQEAPITVMNRNVCSKLYDVAITQGQICAGDKETNTCLGDSGGP 230

  Fly   603 LACGSGSSVR----LKGIFAGENSCGEGQTVRFAKPDI--------KWINTAFAENNK 648
            |    |..|.    |:.:..|..|.|:   :....|.|        .|||...::..|
  Fly   231 L----GGVVNYYGDLRFVQYGITSFGD---IECRSPSIYTDLSTYSGWINMVVSQYRK 281

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scaf	NP_610180.1	Atrophin-1	<63..>338	CDD:460830
		CLIP_SPH_Scar	343..408	CDD:465747	9/40 (23%)
		Tryp_SPc	428..616	CDD:238113	58/211 (27%)
CG43335	NP_001247121.1	Tryp_SPc	42..275	CDD:238113	67/252 (27%)