DRSC/TRiP Functional Genomics Resources

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Protein Alignment scaf and CG43124

DIOPT Version :10

Sequence 1:NP_610180.1 Gene:scaf / 35505 FlyBaseID:FBgn0033033 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_001247345.1 Gene:CG43124 / 12798282 FlyBaseID:FBgn0262587 Length:245 Species:Drosophila melanogaster


Alignment Length:108 Identity:37/108 - (34%)
Similarity:62/108 - (57%) Gaps:10/108 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   435 PWQAMILRESSKTLICGGAIIGDQFVLSSASCVNGLPVTDIRVKAGEWELGSTNEPLPFQLTGVK 499
            ||.|.||.:|.  :||.||:|.:.:||::|||........:|:.:|.::....|    |::|...
  Fly    41 PWLAEILSDSK--VICAGALINNLYVLTAASCFKENEKLTVRLGSGYFDKSYEN----FRVTKAY 99

  Fly   500 TVDVHPDYDPSTNSHDLAIIRLERRLEFASHIQPICISDEDPK 542
            ....|   .|:.|:::|.|.||:..:||.:||:|:||: :.||
  Fly   100 FWMTH---FPANNTNNLCIFRLQTEVEFKTHIRPMCIT-KSPK 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scafNP_610180.1 Atrophin-1 <63..>338 CDD:460830
CLIP_SPH_Scar 343..408 CDD:465747
Tryp_SPc 428..616 CDD:238113 37/108 (34%)
CG43124NP_001247345.1 Tryp_SPc 33..>133 CDD:473915 33/100 (33%)
Blue background indicates that the domain is not in the aligned region.

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