DRSC/TRiP Functional Genomics Resources

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Protein Alignment Not3 and AT5G18230

DIOPT Version :9

Sequence 1:NP_001260712.1 Gene:Not3 / 35501 FlyBaseID:FBgn0033029 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_001330084.1 Gene:AT5G18230 / 831941 AraportID:AT5G18230 Length:866 Species:Arabidopsis thaliana


Alignment Length:962 Identity:319/962 - (33%)
Similarity:465/962 - (48%) Gaps:220/962 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAATRKLQGEIDRCLKKVAEGVETFEDIWKKVHNATNTNQKQKHLQEKYEADLKKEIKKLQRLRD 65
            |.|:|||||||||.||||.|||:.|:.||.||::..|.|||     ||:|||||||||||||.||
plant     1 MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNVNQK-----EKFEADLKKEIKKLQRYRD 60

  Fly    66 QIKSWIASAEIKDK-------SSLLENRRLIETQMERFKVVERETKTKAYSKEGLGAAQKMDPAQ 123
            |||:||.|:|||||       .||::.|:|||.:|||||:.|:||||||:||||||...|.||.:
plant    61 QIKTWIQSSEIKDKKVSASYEQSLVDARKLIEKEMERFKICEKETKTKAFSKEGLGQQPKTDPKE 125

  Fly   124 RIKDDARNWLTSSISSLQIQIDQYESEIESLLAGKKKRLDRDKQERMDDLRGKLDRHKFHITKLE 188
            :.|.:.|:||.:.:|.|:.|||.:|:|:|.|...|.|    .:..|:..|...:.|||.||.|||
plant   126 KAKSETRDWLNNVVSELESQIDSFEAELEGLSVKKGK----TRPPRLTHLETSITRHKDHIIKLE 186

  Fly   189 TLLRLLDNDGVEAEQVNKIKDDVEYYIDSSQEPDFEE--------NEFIYDDIIGLDEVELSGTA 245
            .:|||||||.:..||||.:||.::.|::.:|: ||:|        :....|::.||:::..:|..
plant   187 LILRLLDNDELSPEQVNDVKDFLDDYVERNQD-DFDEFSDVDELYSTLPLDEVEGLEDLVTAGPL 250

  Fly   246 TTDSNNSNETSGSPSSVTSGGSPSQS------PVTV---------------QQI-LNTSSQGAAS 288
                     ..|:|.|:.|..:.|.|      |:|:               |.| |.|..|....
plant   251 ---------VKGTPLSMKSSLAASASQVRVSIPITLLLKIFCLCFFIFALFQSISLPTHHQEKTE 306

  Fly   289 SGSSAASAALFQQQLTAAQSNGNNVGYASDTSA-------------ASSSATTSTDPAGGTVAVN 340
            ..|...|:|....: |....||..:..|..|.|             :::|.|.||.....| ::.
plant   307 DTSLPDSSAEMVPK-TPPPKNGAGLHSAPSTPAGGRPSLNVPAGNVSNTSVTLSTSIPTQT-SIE 369

  Fly   341 CVGGLADKRNKSSESNALKLKPQPHQLIKPTPVRATAKLPLSSDTQVNKIVSSTPSKNQQQLPTA 405
            .:|.|:....|..::..|..: :|...:..||:|...::.:.:..|.::..|..|:...:...|:
plant   370 SMGSLSPVAAKEEDATTLPSR-KPPSSVADTPLRGIGRVGIPNQPQPSQPPSPIPANGSRISATS 433

  Fly   406 ASIVA-TSAMQSQSSIGSCSS-----------TGGTGASQSASSGNNPGNNPAVQPNAPTPGQSG 458
            |:.|| .:.|..:|::...:|           .|..|    .:|.:|||:               
plant   434 AAEVAKRNIMGVESNVQPLTSPLSKMVLPPTAKGNDG----TASDSNPGD--------------- 479

  Fly   459 IAAAAASTNVVSATIVSSA-------------NVQGQSVIQPTPTIAFAAVAKHNTSLLENGPVL 510
              .||:.....|.:|||.:             .|:|::.|.|.....|          |:....:
plant   480 --VAASIGRAFSPSIVSGSQWRPGSPFQSQNETVRGRTEIAPDQREKF----------LQRLQQV 532

  Fly   511 QQ---QLAVTPTVAAIVGAGTQAQ---QKHVPPLSNLQTNSPHIQNGLPVSDSTNDNSCNVVDTI 569
            ||   .|...|:::    .|.:.|   |:..|.|....:.|||...|:.|...    ..||:.:.
plant   533 QQGHGNLLGIPSLS----GGNEKQFSSQQQNPLLQQSSSISPHGSLGIGVQAP----GFNVMSSA 589

  Fly   570 SLKTMAQDAINRSAIDPNSLNQ---QQTSSIDLRQPQSQKSLLQHFNSETNTNQQQLTSQQQQQL 631
            ||:..:           |:::|   ||.|..|          :.|..:: :.:||.|........
plant   590 SLQQQS-----------NAMSQQLGQQPSVAD----------VDHVRND-DQSQQNLPDDSASIA 632

  Fly   632 QNNSLAATTGSNNGTSTGSGL-------MNVAN----ATGQPISGNAKTHACQPQQMATTEAHIP 685
            .:.::.:...|.....|.||:       :.|::    :.||||         ||.|.:::     
plant   633 ASKAIQSEDDSKVLFDTPSGMPSYMLDPVQVSSGPDFSPGQPI---------QPGQSSSS----- 683

  Fly   686 TLLGV------TPLG----PTPLQKEH-QM-QFQMMEAAYYHLPQPMDTEKLQTYFHRAPVLTPS 738
              |||      :.||    |:.:...| || ..||:|||:|..|||.|:|:.:.|..|.|.:||.
plant   684 --LGVIGRRSNSELGAIGDPSAVGPMHDQMHNLQMLEAAFYKRPQPSDSERPRPYSPRNPAITPQ 746

  Fly   739 HYPQAQMPIYDTVEFYQRL-----STETLFFVFYYMEGSKAQYLAAKALKKQSWRFHTKYMMWFQ 798
            .:||.|.||.:....::||     .|:||||.|||.:.|..||||||.|||||||:|.|:..|||
plant   747 TFPQTQAPIINNPLLWERLGSDAYGTDTLFFAFYYQQNSYQQYLAAKELKKQSWRYHRKFNTWFQ 811

  Fly   799 RHEEPKIINDDYEQGTYIYFDYEK---------WSQRKKEGFTFEYKYLEDK 841
            ||:||||..|:||||.|:|||::.         |.||.|..|||||.||||:
plant   812 RHKEPKIATDEYEQGAYVYFDFQTPKDENQEGGWCQRIKNEFTFEYSYLEDE 863

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Not3NP_001260712.1 Not3 3..233 CDD:281986 125/244 (51%)
DUF3682 428..>509 CDD:289231 17/93 (18%)
NOT2_3_5 711..836 CDD:282064 70/138 (51%)
AT5G18230NP_001330084.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 233 1.000 Domainoid score I640
eggNOG 1 0.900 - - E1_COG5665
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 393 1.000 Inparanoid score I490
OMA 1 1.010 - - QHG53956
OrthoDB 1 1.010 - - D1109812at2759
OrthoFinder 1 1.000 - - FOG0004227
OrthoInspector 1 1.000 - - oto2941
orthoMCL 1 0.900 - - OOG6_101346
Panther 1 1.100 - - LDO PTHR23326
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2972
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.840

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