Protein Alignment Not3 and Rga

DIOPT Version :9

• Sequence 1: NP_001260712.1
• Gene: Not3 / 35501
• FlyBaseID: FBgn0033029
• Length: 844
• Species: Drosophila melanogaster
• Sequence 2: NP_730966.1
• Gene: Rga / 40683
• FlyBaseID: FBgn0017550
• Length: 585
• Species: Drosophila melanogaster
• Alignment Length: 681
• Identity: 144/681 - (21%)
• Similarity: 218/681 - (32%)
• Gaps: 252/681 - (37%)

  Fly   242 SGTATTDSNNSNETSGSPSSVTSGGSPSQSPVTVQQ---ILNTSSQ---GAASSGSSAASAALFQ 300
            ||...||..||     .|.:...|.:|.|.....||   ..|.::|   |..:..|...:|.||.
  Fly    39 SGMFQTDFANS-----YPGTANYGQAPQQQQQQQQQPQLSPNRNAQLSVGGPAISSGNRNANLFG 98

  Fly   301 Q----QLTAAQSNG----NNVGYASDTSAASSSATTSTDPAGGTVAVN--CVGG----------L 345
            |    :..|.|..|    :|:|....|....    ..|...||....|  ..||          |
  Fly    99 QRQFVERRAMQGLGSGPMSNMGNFMQTGRGG----YGTGGGGGGPLNNFHVFGGGGGSDTSTPAL 159

  Fly   346 ADKRNKSSESNAL----KLKPQPHQLIKP--TPVR------ATAKLPLSSDTQVNKIVSSTPSKN 398
            .|.....|.:||.    :..||.:.|..|  .|..      ...|.|.|..::........|:
  Fly   160 LDPTEFPSLTNARGQNDQTLPQSNPLQPPGSKPYGNFFTSFGMVKQPTSEQSEFTMSNEDFPA-- 222

  Fly   399 QQQLPTAASIVATSAMQSQSSIGSCSSTGGTG---------------------ASQSASSGNNPG 442
               ||...:...|:     :::||.:.|||:|                     .|.|.|||:|.|
  Fly   223 ---LPGTQNSDGTT-----NAVGSVAGTGGSGGASTENHLDGTEKPMNSIVVSGSASGSSGSNVG 279

  Fly   443 NNPAVQPN-------------------APTPGQSGIAAAAASTNVVSATIV----SSANVQGQSV 484
               .|..|                   |.:.|..|:...||| .||..:.|    |::.:.|.:.
  Fly   280 ---VVGGNGLGAVGSGIGGLAVGGGGGAGSSGGGGVGGNAAS-GVVGGSHVGLVGSNSGIGGVNS 340

  Fly   485 IQPTPTIAFAAVAKHNTSLLENGPVLQQQLAVTPTVAAIVGAGTQAQQKHVPPLSNLQTNSPHIQ 549
            :                                |...|::|.|           ..|.:.|....
  Fly   341 V--------------------------------PNSNAMMGVG-----------GGLGSGSGSSG 362

  Fly   550 NGLPVSDSTNDNSCNVVDTISLKTMAQDAINRSAIDPNSLNQQQTSSIDLRQPQSQKSLLQHFNS 614
            :|.. .:..||||.|            |.:.:|.:        |||      |..:.:.:    .
  Fly   363 SGAG-GEHLNDNSSN------------DKLVKSGV--------QTS------PDGKVTNI----P 396

  Fly   615 ETNTNQQ-----QLTSQQQQQLQNNSLAATTGSNNGTSTGSGL-MNVANATGQPISGNAKTHACQ 673
            .|..|.|     .||..:..:...|.:..:.|::   .||.|| :|...:.....:|......|:
  Fly   397 ATMVNNQFGMVGLLTFIRAAETDPNLVTLSLGTD---LTGLGLNLNSQESLHTTFAGPFVAQPCR 458

  Fly   674 PQQMATTEAHIPTLLGVTPLGPTPLQKEHQMQFQMMEAAYYHLPQPMDTEKLQTYFHRAPVLTPS 738
            .|.:   |.::|              .|:.:.|.:             .:||     .||||
  Fly   459 AQDV---EFNVP--------------PEYLINFAI-------------RDKL-----TAPVL--- 485

  Fly   739 HYPQAQMPIYDTVEFYQRLSTETLFFVFYYMEGSKAQYLAAKALKKQSWRFHTKYMMWFQR---- 799
                            ::|..:.|||:||...|...|.:||..|..:.||:|.:..:|..|
  Fly   486 ----------------KKLQEDLLFFLFYTNIGDMMQLMAAAELHSREWRYHVEEKIWITRIPGI 534

  Fly   800 --HEEPKIINDDYEQGTYIYFDYEKWSQRKK 828
              :|:    |...|:||:.|||.:.|.:..|
  Fly   535 DQYEK----NGTKERGTFYYFDAQSWKRLSK 561

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Not3	NP_001260712.1	Not3	3..233	CDD:281986
		DUF3682	428..>509	CDD:289231	22/124 (18%)
		NOT2_3_5	711..836	CDD:282064	32/124 (26%)
Rga	NP_730966.1	NOT2_3_5	445..568	CDD:282064	39/175 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45440496
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR23326
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.940