DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hrm and MCH5

DIOPT Version :9

Sequence 1:NP_001286141.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_014951.4 Gene:MCH5 / 854483 SGDID:S000005833 Length:521 Species:Saccharomyces cerevisiae


Alignment Length:651 Identity:117/651 - (17%)
Similarity:204/651 - (31%) Gaps:233/651 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KIINSQNASKINQKDHKPN-GNTNESRHKTVSLINKKDDKEYDLVP-PDGGW-GWLVLLGSCLTN 66
            |:...:..:|....:.:|: |....|.|.:    :|::|...::.. |:||: .|:|..|..|..
Yeast    57 KVYTKKEVNKGTDIESQPHWGENTSSTHDS----DKEEDSNEEIESFPEGGFKAWVVTFGCFLGL 117

  Fly    67 ILIPGTIKSFGVLFSEFTD--AFNSSPTKAAWIPALCYFLYSSLGPVSSILSVKY----SYRTVT 125
            |...|.:.|.||:.|...|  ..:.|.:...|:.:|..|:.|:    |.|:|..|    .:||:.
Yeast   118 IACFGLLNSTGVIESHLQDNQLSSESVSTIGWLFSLFLFVCSA----SCIISGTYFDRNGFRTIM 178

  Fly   126 LLGGASASLGMILSFWASSIEFLY--ISYGVLVGIGAGLSFPPTVYIVTSYFAKLRGLANGLCIS 188
            ::|......|:..:  |:|.::.:  :|:.::.|.|.|:...|.|.:...||.|.||.|..:...
Yeast   179 IVGTVFHVAGLFAT--ANSTKYWHFILSFAIVCGFGNGIVLSPLVSVPAHYFFKRRGTALAMATI 241

  Fly   189 GSALGSIILPPLLRWLLE-------TYGYHGSCLIMGGITLNVFVAALFYEPVEQHMVRVPRARQ 246
            |.::|.::.|.:||....       |||:     :.|..||.....||.                
Yeast   242 GGSVGGVVFPIMLRSFFSMKSDTDPTYGF-----VWGIRTLGFLDLALL---------------- 285

  Fly   247 ALENIPEEEDIGIVMKFENVDEPVPKNEPADKPLLPYNSPPSPLYLPGDERLQFVRSASAAVVQS 311
                     .:.|::.               |..||:                        |:::
Yeast   286 ---------TLSIILV---------------KERLPH------------------------VIEN 302

  Fly   312 YSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSSSNKLTLRNSSKSRLSKR 376
             ||.|   :||.|.|                                      ||          
Yeast   303 -SKDG---ESRWRYI--------------------------------------LR---------- 315

  Fly   377 SPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTGQDGSYADVDARGQAQQP 441
                   :|:                                                       
Yeast   316 -------VYI------------------------------------------------------- 318

  Fly   442 QRSKFFDLSLLKDPMYLVILISNSTNAISYTNFIILLPSFGEARGFNKSLSAYLLSVVSATDLIG 506
              .:.||.....|..||..::....:.:|..:.:....|:..:.|.:.:.:..|:.:::...:.|
Yeast   319 --LQCFDAKAFLDMKYLFCVLGTVFSELSINSALTYYGSYATSHGISANDAYTLIMIINVCGIPG 381

  Fly   507 RIGGSALSDMGYIPKTWYFVGGLSISGLSL---------ALLPFAWTYSSVCFWCALFGLASGIY 562
            |.....|||.         .|..:::..:|         ..|||....:::....||:|..||..
Yeast   382 RWVPGYLSDK---------FGRFNVAIATLLTLFIVMFVGWLPFGTNLTNMYVISALYGFCSGSV 437

  Fly   563 VGITAVIMADMLGTERLTSSYGISLFVNGLLQLVGPPLCN--YWFEAVNDYNPLFHALGLTLLAG 625
            ..:..|....:..||.....|....||.|...|||.|:..  ...:...||.......||.....
Yeast   438 FSLLPVCCGQISKTEEFGKRYSTMYFVVGFGTLVGIPITGAIISIKTTADYQHYIIFCGLATFVS 502

  Fly   626 A 626
            |
Yeast   503 A 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_001286141.1 2A0113 49..653 CDD:273325 109/606 (18%)
MFS 59..>234 CDD:119392 49/189 (26%)
MFS <449..633 CDD:119392 38/189 (20%)
MCH5NP_014951.4 MFS_MCT_SLC16 106..510 CDD:340910 106/598 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I1261
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.920

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