DRSC/TRiP Functional Genomics Resources

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Protein Alignment hrm and AT5G50630

DIOPT Version :10

Sequence 1:NP_610174.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_568735.1 Gene:AT5G50630 / 835132 AraportID:AT5G50630 Length:540 Species:Arabidopsis thaliana


Alignment Length:625 Identity:120/625 - (19%)
Similarity:221/625 - (35%) Gaps:206/625 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 RHKTVSLINKKDDKEYDLVPPDGGWGWLVLLGSCLTNILIPGTIKSFGVLF-SEFTDAFNSS--- 90
            |||...|:|.:               |||.:.:....     ::...|.|| ...:.|..:|   
plant     6 RHKLELLVNDR---------------WLVFVCAMWVQ-----SVAGVGYLFGGSMSPAIKTSLGY 50

  Fly    91 PTKAAWIPALCYFLYSSLGPVSSILSVKYSYRTVTLLGGASASL---GMI----------LSFWA 142
            ..|...:..:...|..::|.||..|| :.|...|.||.||:.:|   |::          |..| 
plant    51 NQKQIALLGVAKNLGDAIGFVSGALS-EVSPSWVVLLVGATQNLFGYGVVWLVVTGQLPNLPLW- 113

  Fly   143 SSIEFLYISYGVLVGIGAGLSFPPTVYIVTSY--FAKLRGLANGLCISGSALGSIILPPLLRWLL 205
                .|:::  :.||.. |.::..|..:|:..  |.:.||...|:....|.|...||..:  :|:
plant   114 ----MLFVA--IFVGTN-GETYYNTASLVSCIHNFPESRGPVVGILKGFSGLSGAILTQV--YLM 169

  Fly   206 ETYGYHGSCLIMGGITLNVFVAALFY--EPVEQHMVRVPRARQALENIPEEEDIGIVMKFENVDE 268
            ....:..|.::|..:...|.|.||.:  .|||         |....|:..::     ::|     
plant   170 FNPSHDSSVILMVALGPPVVVLALLFIVRPVE---------RSCRTNLRSDD-----LRF----- 215

  Fly   269 PVPKNEPADKPLLPYN-SPPSPLYLPG-------DERLQFVRSASAAVVQSYSKSGDEFQSRSRK 325
                       |..|. .....:||.|       .:..|.:.:.|.|::..:             
plant   216 -----------LAIYGFCVVLAVYLLGLLVLQSVFDMTQTIITTSGAILVIF------------- 256

  Fly   326 ISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSSSN----KLTLRNSSKSRLSKRSPSTSSFLYV 386
            :..||.:| .:..|..|  |:.:|: ...||.|:.:    :..:..|.:....||:|        
plant   257 MVVPVLVP-FSSVFISG--NNVTSV-KPEEGTSNVDQHEARTLIERSDRPPEKKRAP-------- 309

  Fly   387 STPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTGQDGSYADVDARGQAQQPQRSKFFDLSL 451
                                               ..|:|  :..:.|.|||         |..|
plant   310 -----------------------------------CIGED--FTLLQALGQA---------DFWL 328

  Fly   452 LKDPMYLVILISNSTNAISYTNFIILLPSFGE---ARGFNKSLSAYLLSVVSATDLIGRIGGSAL 513
            :.  |.||:.:.:.         |.::.:.|:   :.|:  |.:...:|::|.::.:||:.|...
plant   329 IF--MSLVLGVGSG---------ITIIDNLGQICYSLGY--SNTKIFVSLISISNFLGRVAGGYF 380

  Fly   514 SDMGY----IPKTWYFVGGLSISG----LSLALLPFA--WTYSSVCFWCALFGLASGIYVGITAV 568
            |::..    :|:|      |::|.    :||.|:.:|  |. ..:.....:.|:..|.:..|...
plant   381 SELIIRKLSLPRT------LAMSVVQAIMSLGLIYYAIDWP-GKIYVVTIVIGMGYGAHWAIAPA 438

  Fly   569 IMADMLGTERLTSSYGISLFVNGLLQLVGPPLCNYWFEAV 608
            .::|:.|.:...|.|.        .|:...|:.::.|..|
plant   439 SVSDIFGLKSFGSLYN--------FQITALPIGSFVFSGV 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_610174.1 MFS_MCT_SLC16 55..>231 CDD:340910 46/194 (24%)
MFS <451..633 CDD:475125 34/171 (20%)
AT5G50630NP_568735.1 MFS_Mch1p_like 16..516 CDD:340912 115/615 (19%)

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