DRSC/TRiP Functional Genomics Resources

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Protein Alignment hrm and AT4G34950

DIOPT Version :10

Sequence 1:NP_610174.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_195221.1 Gene:AT4G34950 / 829647 AraportID:AT4G34950 Length:567 Species:Arabidopsis thaliana


Alignment Length:263 Identity:59/263 - (22%)
Similarity:90/263 - (34%) Gaps:59/263 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 KPNGNTNESRHKTVSLINKKD---DKEYDLVPPDGGWGWLVLLGSCL----TNILIPGTIKSFGV 78
            ||..|..|..|.|:....||.   .:|:.::.......:.||..|.|    |.:.:...:...|:
plant   313 KPLSNEEEENHGTIVTTEKKRPVLGEEHTIMEAMLTVDFWVLFVSFLCGVGTGLAVMNNMGQIGL 377

  Fly    79 LFSEFTDAFNSSPTKAAWIPALCYFLYSSLGPVSSILSVKYSYRTVTLLG------GASASLGMI 137
            ... :||........:.|            |....|||...|...:...|      .|:|.:.|.
plant   378 ALG-YTDVSIFVSMTSIW------------GFFGRILSGTISEHFIKKAGTPRPLWNAAAQIIMA 429

  Fly   138 LSFWASSIEF---LYISYGVLVGIGAGLSFPPTVYIVTSYFA-KLRGLANGLCISGSALGSIILP 198
            :.:...::..   |||. .::||:..|:....||...:..|. |..||...:.|....|||.:..
plant   430 VGYLLMALALPGSLYIG-SMVVGVCYGVRLAITVPTASELFGLKYYGLIYNILILNMPLGSFLFS 493

  Fly   199 PLLRWLLETYGYHGSCLIMGGITLNVFVAALFYEPVEQHMVRVPRARQALENIPEEEDIGIVMKF 263
            .||..||  |....:....||   |..|.|        |..|:               :.|||.|
plant   494 GLLAGLL--YDAEATPTPGGG---NTCVGA--------HCFRI---------------VFIVMAF 530

  Fly   264 ENV 266
            .::
plant   531 ASI 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_610174.1 MFS_MCT_SLC16 55..>231 CDD:340910 44/189 (23%)
MFS <451..633 CDD:475125
AT4G34950NP_195221.1 MFS_Mch1p_like 15..536 CDD:340912 59/263 (22%)
Blue background indicates that the domain is not in the aligned region.

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