DRSC/TRiP Functional Genomics Resources

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Protein Alignment hrm and AT2G30300

DIOPT Version :10

Sequence 1:NP_610174.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_180589.1 Gene:AT2G30300 / 817580 AraportID:AT2G30300 Length:500 Species:Arabidopsis thaliana


Alignment Length:591 Identity:111/591 - (18%)
Similarity:182/591 - (30%) Gaps:208/591 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 WLVLLGSCLTNIL----IPGTIKSFGVLFSEFTDAFNSSPTKAAWIPALCYFLYSS-----LGPV 111
            ||.|:.     ||    ..||..||....|:..:....|..|      |.|..::|     ||.:
plant     8 WLSLVA-----ILWLQSFNGTNLSFPAYSSQLKELLKISQFK------LNYLSFASDAGKVLGFI 61

  Fly   112 SSILSVKYSYRTVTLLGGASASLGMILSF---------WAS------SIEFLYISYGVLVGIGA- 160
            |.|.:|......|.|.||:....|..|.:         |.:      :|....::..|.|||.| 
plant    62 SGIAAVYLPLPLVLLAGGSLGFAGYGLQYLSIIKKIICWINTACYIVAINSFPVNRQVAVGITAS 126

  Fly   161 --GLSFPPTVYIVTSYF-AKLRGLANGLCISGS---ALGSIILPPLLRWLLETYGYHGSCLIM-- 217
              |||......:|.|:| ...|..|:|..:..|   .:..::..|:|.       .||....|  
plant   127 YQGLSGKIYTDMVHSFFHTSQREEASGYLLLNSLVPLVACLVTAPMLM-------RHGGDKTMSY 184

  Fly   218 ------GGITLNVFVAALFYEPVEQHMVRVPRARQALENIPEEEDIGIVMKFENVDEPVPKNEPA 276
                  |.|.|.|...|.....|...:|.||.....         :||.:.              
plant   185 SKDVKVGFIVLFVLTIATGIYAVATSLVSVPAVLVL---------VGIALF-------------- 226

  Fly   277 DKPLLPYNSPPSPLYLP---GDERLQFVRSASAAVVQSYSKSGDEFQSRSRKISTPVRLPQRNQT 338
               ||      :||.:|   |.:.|.               |..:.|.:...:..||        
plant   227 ---LL------APLAIPIGVGFKELM---------------SSRKTQQKVHDLEAPV-------- 259

  Fly   339 FTPGQLNSQSSLYAVPEGRSSSNKLTLRNSSKSRLSKRSPSTSSFLYVSTPYHGSTLSFQPKEFS 403
                     ...|.|.|..:.                                      :.:||.
plant   260 ---------DKFYFVEEDHTK--------------------------------------EEEEFE 277

  Fly   404 SHLSLRSMGSSGTGHAGDSTGQDGSYADVDARGQAQQPQRSKFFDLSLLKDPMYLVILISNSTNA 468
            .                         |.:..:.:.:..|..|..|..:     |..:.:...|..
plant   278 K-------------------------AIIGVKEEVEWTQLWKKLDFWI-----YFGLYLFGPTVG 312

  Fly   469 ISYTNFIILLPSFGEARGFNKSLSAYLLSVVSATDLIGRIGGSAL----SDMGYIPKTWYFVGGL 529
            :.:||   .|....|:||  .:.::.|:::.|:....||:..|.|    |...|:|.:...:.|.
plant   313 LVFTN---NLGQIAESRG--STATSSLVALSSSFGFFGRLLPSLLDYFFSRNKYMPSSPVSMAGS 372

  Fly   530 SISGLSLALLPFAWTYSSVCFWCALFGLASGIYVGITAVIMADMLGTER-------LTSSYGISL 587
            .::.::..||....:..::....|:.|:.||....::..:.|::.||:.       :..|..:..
plant   373 LVAMVASFLLLLIDSDIALYIGTAMIGIFSGALTSLSVTMTAELFGTKHFGVNHNIVVGSIPLGS 437

  Fly   588 FVNGLL 593
            |..|||
plant   438 FSFGLL 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_610174.1 MFS_MCT_SLC16 55..>231 CDD:340910 53/213 (25%)
MFS <451..633 CDD:475125 32/154 (21%)
AT2G30300NP_180589.1 MFS 6..482 CDD:475125 111/591 (19%)

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