DRSC/TRiP Functional Genomics Resources

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Protein Alignment hrm and AT2G28120

DIOPT Version :10

Sequence 1:NP_610174.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_180379.1 Gene:AT2G28120 / 817358 AraportID:AT2G28120 Length:577 Species:Arabidopsis thaliana


Alignment Length:653 Identity:121/653 - (18%)
Similarity:206/653 - (31%) Gaps:255/653 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 WLVLLGSCLTNILIPGTIKSFGVLFSEFTDAFNSSPTKAAWIPALCYF--LYSSLGPVSSILSVK 118
            |.::..|.|. :...|....||....:.........|.   :..|.:|  |.:::|.:|.:::..
plant    18 WFMVFASFLI-MACAGATYLFGTYSKDIKSTLGYDQTT---LNLLGFFKDLGANVGVLSGLIAEV 78

  Fly   119 YSYRTVTLLGGASASLGMIL------------SFWASSIEFLYISYGVLVGIGA-GLSFPPTVYI 170
            .....|..:|.|...:|..:            ..|...   |||.      ||| ..:|..|..:
plant    79 TPTWFVLTIGSAMNFVGYFMIWLTVTGKVAKPKVWQMC---LYIC------IGANSQNFANTGAL 134

  Fly   171 VT--SYFAKLRGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIM------GGITLNVFV- 226
            ||  ..|.:.||:..||......|...|...|   ....||:....||:      ..::| ||| 
plant   135 VTCVKNFPESRGVMLGLLKGYVGLSGAIFTQL---YFAIYGHDSKSLILLIAWLPAAVSL-VFVY 195

  Fly   227 -------------AALFYE---------------PVEQHMVRVPRARQALE-------------- 249
                         .::||:               .:.:..|...:|..|..              
plant   196 LIREKKVVRQRNELSVFYQFLYISIFLALFLMAMNIAEKQVHFSKAAYAASATICCALLFVPLTV 260

  Fly   250 NIPEEEDIGIVMKFENVDEPVPKNEPADKPLLPYNSPPSPLYLPGDERLQFVRSASAAVVQSYSK 314
            ::.:|.::..:||       :|..||::   :....|...|.|..|:         ||.|     
plant   261 SVKQELEVWNMMK-------LPIEEPSE---VKVEKPKKELDLDQDK---------AAKV----- 301

  Fly   315 SGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSSSNKLTLRNSSKSRLSKRSPS 379
            :|:|.:::| ..||....|.|.:.:|            :.:...|::.:                
plant   302 NGEEKETKS-CFSTVFSPPPRGEDYT------------ILQALLSTDMI---------------- 337

  Fly   380 TSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTGQDGSYADVDARGQAQQPQRS 444
               .|:|:|                   ...:|||.|  |.|:.||                   
plant   338 ---ILFVAT-------------------FCGLGSSLT--AVDNLGQ------------------- 359

  Fly   445 KFFDLSLLKDPMYLVILISNSTNAISYTNFIILLPSFGEARGF-NKSLSAYLLSVVSATDLIGRI 508
                                                .||:.|: |.::|:: :|:||..:..||:
plant   360 ------------------------------------IGESLGYPNHTVSSF-VSLVSIWNYFGRV 387

  Fly   509 GGSALSDMGYI--------PKTWYFVGGLSISGLSLALLPFAWTYSSVCFWCALFGLASGIYVGI 565
            ....:|:  |:        |.....|..||.:|..|...|..   .||.....|.|.:.|..:.:
plant   388 FSGFVSE--YLLAKYKLPRPLMMTLVLLLSCAGHLLIAFPVP---GSVYIASILMGFSFGAQLPL 447

  Fly   566 TAVIMADMLGTE---------RLTS---SYGISLFVNGLLQLVGPPLCNYWFEAVNDYNPLFHAL 618
            ...|::::.|.:         :|.|   ||.:::.|.|:|         |..||:....    |.
plant   448 LFAIISELFGLKYYSTLFNCGQLASPLGSYILNVRVTGML---------YDKEALKQLT----AR 499

  Fly   619 GLT 621
            |||
plant   500 GLT 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_610174.1 MFS_MCT_SLC16 55..>231 CDD:340910 43/211 (20%)
MFS <451..633 CDD:475125 40/192 (21%)
AT2G28120NP_180379.1 Nodulin-like 17..262 CDD:284279 48/260 (18%)
UhpC <336..544 CDD:441872 51/281 (18%)

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